RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
RNF4-218ENST00000513284 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
RNF4-218ENST00000513284 PRG3Q9Y2Y8 225 aaPredicted RBP12.61□□□□□ -0.39
RNF4-218ENST00000513284 V9GY48 417 aaPredicted RBP12.61□□□□□ -0.39
RNF4-218ENST00000513284 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
RNF4-218ENST00000513284 ZMYND10O75800 440 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 CALM1P0DP23 149 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 CALM2P0DP24 149 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 CALM3P0DP25 149 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 GLUD2P49448 558 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 PRKCEQ02156 737 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 MTAPQ13126 283 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 ZBTB41Q5SVQ8 909 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 RSPO2Q6UXX9 243 aaPredicted RBP12.6□□□□□ -0.39
RNF4-218ENST00000513284 SMG8Q8ND04 991 aaKnown RBP12.6□□□□□ -0.39
RNF4-218ENST00000513284 ITFG1Q8TB96 612 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 URGCPQ8TCY9 931 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 RUFY2Q8WXA3 655 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 FGF13Q92913 245 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 PGBD4Q96DM1 585 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 MBOAT7Q96N66 472 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 GPR62Q9BZJ7 368 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 RSAD1Q9HA92 442 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 DISC1Q9NRI5 854 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 CDH7Q9ULB5 785 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 SSX2IPQ9Y2D8 614 aa12.6□□□□□ -0.39
RNF4-218ENST00000513284 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
RNF4-218ENST00000513284 TM4SF5O14894 197 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 RPL17P18621 184 aaKnown RBP12.59□□□□□ -0.39
RNF4-218ENST00000513284 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF4-218ENST00000513284 PMLP29590 882 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 RPS9P46781 194 aaKnown RBP12.59□□□□□ -0.39
RNF4-218ENST00000513284 OR1G1P47890 313 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 RAB27AP51159 221 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 CDC42EP1Q00587 391 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 DSC1Q08554 894 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 N4BP2L1Q5TBK1 243 aaPredicted RBP12.59□□□□□ -0.39
RNF4-218ENST00000513284 PPP1R18Q6NYC8 613 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 RHPN2Q8IUC4 686 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 NETO1Q8TDF5 533 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 PHKBQ93100 1093 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 GJA10Q969M2 543 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 PLA2G2FQ9BZM2 168 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 MINDY3Q9H8M7 445 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
RNF4-218ENST00000513284 AGPAT5Q9NUQ2 364 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 SUCLA2Q9P2R7 463 aaPredicted RBP12.59□□□□□ -0.39
RNF4-218ENST00000513284 SAMM50Q9Y512 469 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 NOTCH4Q99466 2003 aa12.59□□□□□ -0.39
RNF4-218ENST00000513284 WDR64B1ANS9 1081 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 SGSM2O43147 1006 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 CIITAP33076 1130 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 MCM5P33992 734 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 MAGEA9P43362 315 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 MTERF2Q49AM1 385 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 PRR16Q569H4 304 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 ZNF410Q86VK4 478 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 FAM193BQ96PV7 902 aaPredicted RBP12.58□□□□□ -0.4
RNF4-218ENST00000513284 NELL2Q99435 816 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 KXD1Q9BQD3 176 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 INO80BQ9C086 356 aaPredicted RBP12.58□□□□□ -0.4
RNF4-218ENST00000513284 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 SEMA4GQ9NTN9 838 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 GMEB2Q9UKD1 530 aa12.58□□□□□ -0.4
RNF4-218ENST00000513284 RBM8AQ9Y5S9 174 aaKnown RBP12.58□□□□□ -0.4
RNF4-218ENST00000513284 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 MSH4O15457 936 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 HRO43593 1189 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
RNF4-218ENST00000513284 RETP07949 1114 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 NCLP19338 710 aaKnown RBP12.57□□□□□ -0.4
RNF4-218ENST00000513284 SHC2P98077 582 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 ELMSAN1Q6PJG2 1045 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 TPRG1Q6ZUI0 275 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 CELF5Q8N6W0 485 aaKnown RBP12.57□□□□□ -0.4
RNF4-218ENST00000513284 GSTCDQ8NEC7 633 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 GAD1Q99259 594 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 FAM126AQ9BYI3 521 aaPredicted RBP12.57□□□□□ -0.4
RNF4-218ENST00000513284 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
RNF4-218ENST00000513284 ANGPTL2Q9UKU9 493 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 CNOT1A5YKK6 2376 aaKnown RBP12.57□□□□□ -0.4
RNF4-218ENST00000513284 CNTNAP2Q9UHC6 1331 aa12.57□□□□□ -0.4
RNF4-218ENST00000513284 ARL5CA6NH57 179 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 NRG2O14511 850 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms