RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TGM5O43548 720 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ACTN4O43707 911 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 STX6O43752 255 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 HTR3BO95264 441 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 RARBP10826 455 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ITGA6P23229 1130 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SULT1E1P49888 294 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLC12A3P55017 1021 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLC35G1Q2M3R5 365 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 MIER2Q8N344 545 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 GALNT15Q8N3T1 639 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 PRR18Q8N4B5 295 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 C7orf43Q8WVR3 580 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLC5A5Q92911 643 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 NUP62CLQ9H1M0 184 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 LIN7BQ9HAP6 207 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 PDE7BQ9NP56 450 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 RRP7BPQ9NSQ0 103 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 UBAP1Q9NZ09 502 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLC13A4Q9UKG4 626 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 PCDHA8Q9Y5H6 950 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 BRD4O60885 1362 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ADGBQ8N7X0 1667 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ADGRL2O95490 1459 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 MBD5Q9P267 1494 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SHANK2Q9UPX8 1470 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 A0A0B4J269 797 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 AGRPO00253 132 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 AP3D1O14617 1153 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 PDCP20941 246 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 BMP6P22004 513 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 IDUAP35475 653 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ADD1P35611 737 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCT4P50991 539 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 RPS26P62854 115 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 RABEP1Q15276 862 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZACNQ401N2 412 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 FBXO47Q5MNV8 452 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 NBPF12Q5TAG4 269 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZCCHC12Q6PEW1 402 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ELMSAN1Q6PJG2 1045 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 NLRP10Q86W26 655 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 SULF2Q8IWU5 870 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 LMBR1Q8WVP7 490 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 UIMC1Q96RL1 719 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 CRLF2Q9HC73 371 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 ABCA9Q8IUA7 1624 aa6.89□□□□□ -1.31
TRAPPC11-209ENST00000512476 CYP2D7A0A087X1C5 515 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 UBXN8O00124 270 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 NDC80O14777 642 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 AKAP5P24588 427 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 HSPA1LP34931 641 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 UAP1L1Q3KQV9 507 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 CREB3L3Q68CJ9 461 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 CEP70Q8NHQ1 597 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 RFFLQ8WZ73 363 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 MAML1Q92585 1016 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 LRRC59Q96AG4 307 aaKnown RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 CEP295NLQ96MC4 621 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 THAP9Q9H5L6 903 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 FEM1BQ9UK73 627 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 EDARQ9UNE0 448 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 SIK3Q9Y2K2 1263 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 JRKLQ9Y4A0 524 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 PCDHGC5Q9Y5F6 944 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ARAP3Q8WWN8 1544 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 KDM6BO15054 1643 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 PROM1O43490 865 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 BEST1O76090 585 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 HMOX1P09601 288 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 PCNAP12004 261 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 MAPK7Q13164 816 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLC2A7Q6PXP3 512 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 RGS9BPQ6ZS82 235 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 TTLL7Q6ZT98 887 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 RTN4RL1Q86UN2 441 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 RNF168Q8IYW5 571 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 TOR1AIP2Q8NFQ8 470 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 OR6C4Q8NGE1 309 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 OR1N1Q8NGS0 311 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 CEP76Q8TAP6 659 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 SUN5Q8TC36 379 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ST8SIA4Q92187 359 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 CNKSR1Q969H4 720 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 EXOC4Q96A65 974 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZDHHC15Q96MV8 337 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZCWPW1Q9H0M4 648 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 AP5M1Q9H0R1 490 aa6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZNHIT6Q9NWK9 470 aaKnown RBP6.88□□□□□ -1.31
TRAPPC11-209ENST00000512476 PPP4R2Q9NY27 417 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms