RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 LRRC55Q6ZSA7 311 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 USP37Q86T82 979 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 ZBTB8OSQ8IWT0 167 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 FAM186BQ8IYM0 893 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 DAW1Q8N136 415 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 CCDC51Q96ER9 411 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 CAPNS2Q96L46 248 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 NDST4Q9H3R1 872 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 ST6GALNAC4Q9H4F1 302 aa8.84□□□□□ -0.99
HTT-209ENST00000512068 ZNHIT6Q9NWK9 470 aaKnown RBP8.84□□□□□ -0.99
HTT-209ENST00000512068 GDF9O60383 454 aa8.83□□□□□ -1
HTT-209ENST00000512068 LGALS2P05162 132 aa8.83□□□□□ -1
HTT-209ENST00000512068 HOXC6P09630 235 aa8.83□□□□□ -1
HTT-209ENST00000512068 HOXD10P28358 340 aa8.83□□□□□ -1
HTT-209ENST00000512068 PSMC4P43686 418 aa8.83□□□□□ -1
HTT-209ENST00000512068 NPTX2P47972 431 aa8.83□□□□□ -1
HTT-209ENST00000512068 LIG4P49917 911 aa8.83□□□□□ -1
HTT-209ENST00000512068 CPT1AP50416 773 aa8.83□□□□□ -1
HTT-209ENST00000512068 CYP2J2P51589 502 aa8.83□□□□□ -1
HTT-209ENST00000512068 GTF2BQ00403 316 aa8.83□□□□□ -1
HTT-209ENST00000512068 CETN1Q12798 172 aa8.83□□□□□ -1
HTT-209ENST00000512068 MYBPC2Q14324 1141 aa8.83□□□□□ -1
HTT-209ENST00000512068 MXD4Q14582 209 aaPredicted RBP8.83□□□□□ -1
HTT-209ENST00000512068 PLCB4Q15147 1175 aa8.83□□□□□ -1
HTT-209ENST00000512068 ZNF484Q5JVG2 852 aa8.83□□□□□ -1
HTT-209ENST00000512068 DNTTIP2Q5QJE6 756 aaKnown RBP8.83□□□□□ -1
HTT-209ENST00000512068 IER5Q5VY09 327 aa8.83□□□□□ -1
HTT-209ENST00000512068 VASH1Q7L8A9 365 aaPredicted RBP8.83□□□□□ -1
HTT-209ENST00000512068 TRIM50Q86XT4 487 aa8.83□□□□□ -1
HTT-209ENST00000512068 IRF2BP1Q8IU81 584 aa8.83□□□□□ -1
HTT-209ENST00000512068 NEK11Q8NG66 645 aa8.83□□□□□ -1
HTT-209ENST00000512068 CACTINQ8WUQ7 758 aaKnown RBP8.83□□□□□ -1
HTT-209ENST00000512068 AFG1LQ8WV93 481 aa8.83□□□□□ -1
HTT-209ENST00000512068 CPLX3Q8WVH0 158 aa8.83□□□□□ -1
HTT-209ENST00000512068 PSPC1Q8WXF1 523 aaKnown RBP8.83□□□□□ -1
HTT-209ENST00000512068 TMEM143Q96AN5 459 aa8.83□□□□□ -1
HTT-209ENST00000512068 KCTD15Q96SI1 283 aaPredicted RBP8.83□□□□□ -1
HTT-209ENST00000512068 PCYT2Q99447 389 aa8.83□□□□□ -1
HTT-209ENST00000512068 NAA15Q9BXJ9 866 aaKnown RBP8.83□□□□□ -1
HTT-209ENST00000512068 C2orf40Q9H1Z8 148 aa8.83□□□□□ -1
HTT-209ENST00000512068 DHX33Q9H6R0 707 aaKnown RBP8.83□□□□□ -1
HTT-209ENST00000512068 SUGCTQ9HAC7 445 aa8.83□□□□□ -1
HTT-209ENST00000512068 AGPAT3Q9NRZ7 376 aa8.83□□□□□ -1
HTT-209ENST00000512068 INTS13Q9NVM9 706 aa8.83□□□□□ -1
HTT-209ENST00000512068 TBX20Q9UMR3 447 aa8.83□□□□□ -1
HTT-209ENST00000512068 SRCAPQ6ZRS2 3230 aa8.83□□□□□ -1
HTT-209ENST00000512068 COL1A2P08123 1366 aa8.83□□□□□ -1
HTT-209ENST00000512068 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.82□□□□□ -1
HTT-209ENST00000512068 RASSF10A6NK89 507 aa8.82□□□□□ -1
HTT-209ENST00000512068 K7ERI5 159 aa8.82□□□□□ -1
HTT-209ENST00000512068 HNRNPDLO14979 420 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 MAGEB2O15479 319 aa8.82□□□□□ -1
HTT-209ENST00000512068 DYNC1LI2O43237 492 aaPredicted RBP8.82□□□□□ -1
HTT-209ENST00000512068 STX10O60499 249 aa8.82□□□□□ -1
HTT-209ENST00000512068 AOC2O75106 756 aa8.82□□□□□ -1
HTT-209ENST00000512068 N4BP1O75113 896 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 PPFIA4O75335 1185 aa8.82□□□□□ -1
HTT-209ENST00000512068 MAFO75444 373 aaPredicted RBP8.82□□□□□ -1
HTT-209ENST00000512068 STBD1O95210 358 aa8.82□□□□□ -1
HTT-209ENST00000512068 AFPP02771 609 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 MMP3P08254 477 aa8.82□□□□□ -1
HTT-209ENST00000512068 SMPD1P17405 629 aa8.82□□□□□ -1
HTT-209ENST00000512068 ATP4AP20648 1035 aa8.82□□□□□ -1
HTT-209ENST00000512068 GRM5P41594 1212 aa8.82□□□□□ -1
HTT-209ENST00000512068 MARSP56192 900 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 IGBP1P78318 339 aa8.82□□□□□ -1
HTT-209ENST00000512068 RBL2Q08999 1139 aa8.82□□□□□ -1
HTT-209ENST00000512068 FOXC1Q12948 553 aa8.82□□□□□ -1
HTT-209ENST00000512068 ARHGEF6Q15052 776 aa8.82□□□□□ -1
HTT-209ENST00000512068 SYCP1Q15431 976 aa8.82□□□□□ -1
HTT-209ENST00000512068 PTPN21Q16825 1174 aa8.82□□□□□ -1
HTT-209ENST00000512068 INTS8Q75QN2 995 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 APTXQ7Z2E3 356 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 CACNA2D4Q7Z3S7 1137 aa8.82□□□□□ -1
HTT-209ENST00000512068 TLK2Q86UE8 772 aa8.82□□□□□ -1
HTT-209ENST00000512068 MAP4K3Q8IVH8 894 aa8.82□□□□□ -1
HTT-209ENST00000512068 KSR1Q8IVT5 923 aa8.82□□□□□ -1
HTT-209ENST00000512068 ZC3H3Q8IXZ2 948 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 METTL13Q8N6R0 699 aa8.82□□□□□ -1
HTT-209ENST00000512068 XXYLT1Q8NBI6 393 aa8.82□□□□□ -1
HTT-209ENST00000512068 TMEM161BQ8NDZ6 487 aa8.82□□□□□ -1
HTT-209ENST00000512068 SCLT1Q96NL6 688 aa8.82□□□□□ -1
HTT-209ENST00000512068 PANX2Q96RD6 677 aa8.82□□□□□ -1
HTT-209ENST00000512068 FIZ1Q96SL8 496 aa8.82□□□□□ -1
HTT-209ENST00000512068 MAP7D2Q96T17 732 aa8.82□□□□□ -1
HTT-209ENST00000512068 BAG1Q99933 345 aaPredicted RBP8.82□□□□□ -1
HTT-209ENST00000512068 KATNAL1Q9BW62 490 aa8.82□□□□□ -1
HTT-209ENST00000512068 KCNF1Q9H3M0 494 aa8.82□□□□□ -1
HTT-209ENST00000512068 MMRN2Q9H8L6 949 aa8.82□□□□□ -1
HTT-209ENST00000512068 SPC25Q9HBM1 224 aa8.82□□□□□ -1
HTT-209ENST00000512068 XPNPEP1Q9NQW7 623 aa8.82□□□□□ -1
HTT-209ENST00000512068 LUC7L2Q9Y383 392 aaKnown RBP8.82□□□□□ -1
HTT-209ENST00000512068 TELO2Q9Y4R8 837 aa8.82□□□□□ -1
HTT-209ENST00000512068 CASP8AP2Q9UKL3 1982 aa8.82□□□□□ -1
HTT-209ENST00000512068 ZMYM2Q9UBW7 1377 aa8.82□□□□□ -1
HTT-209ENST00000512068 H3BRB1 525 aa8.81□□□□□ -1
HTT-209ENST00000512068 KIAA0391O15091 583 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms