RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 NT5C3AQ9H0P0 336 aa14.82□□□□□ -0.04
POLR2J3-216ENST00000511773 IFT122Q9HBG6 1241 aa14.82□□□□□ -0.04
POLR2J3-216ENST00000511773 SLC2A4RGQ9NR83 387 aa14.82□□□□□ -0.04
POLR2J3-216ENST00000511773 PATJQ8NI35 1801 aa14.82□□□□□ -0.04
POLR2J3-216ENST00000511773 MTCL1Q9Y4B5 1905 aaKnown RBP14.82□□□□□ -0.04
POLR2J3-216ENST00000511773 DOCK6Q96HP0 2047 aa14.82□□□□□ -0.04
POLR2J3-216ENST00000511773 TGM5O43548 720 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 EDIL3O43854 480 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 GAS2O43903 313 aaKnown RBP14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 RPL17P18621 184 aaKnown RBP14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 GPC5P78333 572 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 FGD1P98174 961 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 UBXN2BQ14CS0 331 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 ADCK5Q3MIX3 580 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 VARS2Q5ST30 1063 aaKnown RBP14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 COLGALT2Q8IYK4 626 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 BICD2Q8TD16 824 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 SHDQ96IW2 340 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 MINDY3Q9H8M7 445 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 COL4A3BPQ9Y5P4 624 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 CACNA1GO43497 2377 aa14.81□□□□□ -0.04
POLR2J3-216ENST00000511773 TDRD15B5MCY1 1934 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 ARL5CA6NH57 179 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 LAMTOR5O43504 91 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 PSMD10O75832 226 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 ITGA4P13612 1032 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 FSHRP23945 695 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 MLH1P40692 756 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 STARD6P59095 220 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 DSG1Q02413 1049 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 CSTF1Q05048 431 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 PARM1Q6UWI2 310 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 ANO5Q75V66 913 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 RNF168Q8IYW5 571 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 RDM1Q8NG50 284 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 PRPF31Q8WWY3 499 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 FGF14Q92915 247 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 TMEM143Q96AN5 459 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 ZFP42Q96MM3 310 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 GAD1Q99259 594 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 APOL6Q9BWW8 343 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 BCO2Q9BYV7 579 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 PRKD2Q9BZL6 878 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 RXFP1Q9HBX9 757 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 ZDHHC7Q9NXF8 308 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 VPS54Q9P1Q0 977 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 CDV3Q9UKY7 258 aaKnown RBP14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 MTF2Q9Y483 593 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 HES2Q9Y543 173 aa14.8□□□□□ -0.04
POLR2J3-216ENST00000511773 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 TDP2O95551 362 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 SCNN1GP51170 649 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 NPEPPSP55786 919 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 NTHL1P78549 312 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 SMG8Q8ND04 991 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 CHD6Q8TD26 2715 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 HDAC7Q8WUI4 952 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 ATRIPQ8WXE1 791 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 SLC7A3Q8WY07 619 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 RABGGTAQ92696 567 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 JPH2Q9BR39 696 aaPredicted RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 EIF2AQ9BY44 585 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 PLEKHA4Q9H4M7 779 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 IPPQ9Y573 584 aa14.79□□□□□ -0.04
POLR2J3-216ENST00000511773 USP24Q9UPU5 2620 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 KANSL1LA0AUZ9 987 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 SPTLC1O15269 473 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 NR1I2O75469 434 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 ERLIN2O94905 339 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 EFEMP2O95967 443 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 CPA1P15085 419 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 CD72P21854 359 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 USP11P51784 963 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 RCAN1P53805 252 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 DSC1Q08554 894 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 LAMTOR4Q0VGL1 99 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 MLF2Q15773 248 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 ZNF528Q3MIS6 628 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 SRGAP1Q7Z6B7 1085 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 GRASPQ7Z6J2 395 aaPredicted RBP14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 CCDC148Q8NFR7 591 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 TBCKQ8TEA7 893 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 PSPC1Q8WXF1 523 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 GPR62Q9BZJ7 368 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 UBN1Q9NPG3 1134 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 FBXO4Q9UKT5 387 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 USP18Q9UMW8 372 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 ZFHX4Q86UP3 3567 aa14.78□□□□□ -0.04
POLR2J3-216ENST00000511773 DCDC2BA2VCK2 349 aa14.77□□□□□ -0.05
POLR2J3-216ENST00000511773 FAM170BA6NMN3 283 aa14.77□□□□□ -0.05
POLR2J3-216ENST00000511773 PRPF3O43395 683 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms