RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 FEZF2Q8TBJ5 459 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 KANSL3Q9P2N6 904 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 HCN4Q9Y3Q4 1203 aa16.99■□□□□ 0.31
COL1A1-213ENST00000511732 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 ARL5CA6NH57 179 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 ALDH2P05091 517 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 EPCAMP16422 314 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 PLA2G5P39877 138 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 PTPN14Q15678 1187 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 COLGALT2Q8IYK4 626 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 GSTCDQ8NEC7 633 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 SLC22A17Q8WUG5 538 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 BSNDQ8WZ55 320 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 ZFP42Q96MM3 310 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 FAM193BQ96PV7 902 aaPredicted RBP16.98■□□□□ 0.31
COL1A1-213ENST00000511732 APOL6Q9BWW8 343 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
COL1A1-213ENST00000511732 UBN1Q9NPG3 1134 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 FAN1Q9Y2M0 1017 aa16.98■□□□□ 0.31
COL1A1-213ENST00000511732 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 LRRIQ4A6NIV6 560 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 TTLL13PA6NNM8 815 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 F8W810 466 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 LILRB3O75022 631 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 AKAP5P24588 427 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 U2AF2P26368 475 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 TRAPPC10P48553 1259 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 SCNN1GP51170 649 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 DSC1Q08554 894 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 NCBP1Q09161 790 aaKnown RBP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 CDCA2Q69YH5 1023 aaPredicted RBP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 HFE2Q6ZVN8 426 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 C12orf76Q8N812 135 aaPredicted RBP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 MCPH1Q8NEM0 835 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 EDAQ92838 391 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 ADAM7Q9H2U9 754 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 POLD4Q9HCU8 107 aa16.97■□□□□ 0.31
COL1A1-213ENST00000511732 PRG3Q9Y2Y8 225 aaPredicted RBP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
COL1A1-213ENST00000511732 NPTXRO95502 500 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 EFEMP2O95967 443 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 EDN1P05305 212 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
COL1A1-213ENST00000511732 WEE2P0C1S8 567 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 CYP11B2P19099 503 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 SP100P23497 879 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-213ENST00000511732 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.31
COL1A1-213ENST00000511732 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.31
COL1A1-213ENST00000511732 GIT2Q14161 759 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 SLC27A1Q6PCB7 646 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 PADI6Q6TGC4 694 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 TAS1R1Q7RTX1 841 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 KLHL5Q96PQ7 755 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 FZD8Q9H461 694 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 POMKQ9H5K3 350 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 USP20Q9Y2K6 914 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 GIT1Q9Y2X7 761 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 PCDHB6Q9Y5E3 794 aa16.96■□□□□ 0.31
COL1A1-213ENST00000511732 TECTAO75443 2155 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 CD2BP2O95400 341 aaKnown RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 CNPP09543 421 aaKnown RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 OR1G1P47890 313 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 ZXDAP98168 799 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 ITIH3Q06033 890 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 IL17AQ16552 155 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 TPRNQ4KMQ1 711 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 RARS2Q5T160 578 aaKnown RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 RNF168Q8IYW5 571 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 FAM122AQ96E09 287 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 TRIM6Q9C030 488 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 PRMT7Q9NVM4 692 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 KLK14Q9P0G3 267 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 NOL7Q9UMY1 257 aaKnown RBP16.95■□□□□ 0.3
COL1A1-213ENST00000511732 PLXNA3P51805 1871 aa16.95■□□□□ 0.3
COL1A1-213ENST00000511732 ARHGEF35A5YM69 484 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 SOD2P04179 222 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 MUTP22033 750 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 CCT6AP40227 531 aaKnown RBP16.94■□□□□ 0.3
COL1A1-213ENST00000511732 PTGDRQ13258 359 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 RABEP1Q15276 862 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 FAM187BQ17R55 369 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 CES5AQ6NT32 575 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 PRIMPOLQ96LW4 560 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 CCDC113Q9H0I3 377 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 BHMT2Q9H2M3 363 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 LRWD1Q9UFC0 647 aa16.94■□□□□ 0.3
COL1A1-213ENST00000511732 DENND4AQ7Z401 1863 aa16.93■□□□□ 0.3
COL1A1-213ENST00000511732 PP2D1A8MPX8 630 aa16.93■□□□□ 0.3
COL1A1-213ENST00000511732 C2CD2LO14523 706 aa16.93■□□□□ 0.3
COL1A1-213ENST00000511732 CLCN4P51793 760 aa16.93■□□□□ 0.3
COL1A1-213ENST00000511732 HAUS3Q68CZ6 603 aa16.93■□□□□ 0.3
COL1A1-213ENST00000511732 TRIM67Q6ZTA4 783 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms