RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 PTK7Q13308 1070 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 TMEM132AQ24JP5 1023 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 HSP90AA4PQ58FG1 418 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 KSR1Q8IVT5 923 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 DRC7Q8IY82 874 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 CCDC155Q8N6L0 562 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 PDLIM2Q96JY6 352 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 FDXACB1Q9BRP7 624 aaPredicted RBP18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 NOC4LQ9BVI4 516 aaKnown RBP18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 XPO4Q9C0E2 1151 aaKnown RBP18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 IFT122Q9HBG6 1241 aa18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 KIAA0100Q14667 2235 aaKnown RBP18.27■□□□□ 0.52
SCAMP1-203ENST00000510030 LGALS16A8MUM7 142 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 CLIC2O15247 247 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 CLDN3O15551 220 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 MATR3P43243 847 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 CYP2J2P51589 502 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 CRYBB1P53674 252 aaPredicted RBP18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 PTGISQ16647 500 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 TSHZ1Q6ZSZ6 1077 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 TAS1R3Q7RTX0 852 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 TRIM59Q8IWR1 403 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 GPD1LQ8N335 351 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 ANKLE1Q8NAG6 615 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 DNAJB3Q8WWF6 145 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 PPP1R9BQ96SB3 815 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 ADPGKQ9BRR6 497 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 IMPACTQ9P2X3 320 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 TNFSF13BQ9Y275 285 aa18.26■□□□□ 0.51
SCAMP1-203ENST00000510030 A0A1W2PQC6 194 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 GJB1P08034 283 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 EIF4BP23588 611 aaKnown RBP18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 MRPS6P82932 125 aaKnown RBP18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 POU5F1Q01860 360 aaKnown RBP18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 VWA3BQ502W6 1294 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 ATF7IP2Q5U623 682 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 GDF6Q6KF10 455 aaPredicted RBP18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 SLC43A3Q8NBI5 491 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 ACO2Q99798 780 aaKnown RBP18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 TCHPQ9BT92 498 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 ADAMTS10Q9H324 1103 aa18.25■□□□□ 0.51
SCAMP1-203ENST00000510030 ARVCFO00192 962 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 EXTL3O43909 919 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 N4BP1O75113 896 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 GPR32O75388 356 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 AKAP3O75969 853 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 TPM1P09493 284 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 DARSP14868 501 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 CETN1Q12798 172 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 TRIM14Q14142 442 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 NOLC1Q14978 699 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 NR1I3Q14994 352 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 SNRNP35Q16560 246 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 KIZQ2M2Z5 673 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 HABP4Q5JVS0 413 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 MPZL3Q6UWV2 235 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 RUFY4Q6ZNE9 571 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 APTXQ7Z2E3 356 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 CCDC51Q96ER9 411 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 FBXL18Q96ME1 805 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 CBWD1Q9BRT8 395 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 MSTO1Q9BUK6 570 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 TARS2Q9BW92 718 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 CRISPLD2Q9H0B8 497 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 NDST4Q9H3R1 872 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 TAB2Q9NYJ8 693 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 AGO2Q9UKV8 859 aaKnown RBP18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 TRPV2Q9Y5S1 764 aa18.24■□□□□ 0.51
SCAMP1-203ENST00000510030 ITIH6Q6UXX5 1313 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 A0A0B4J269 797 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 ZNF233A6NK53 670 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 SGPL1O95470 568 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 DEKP35659 375 aaKnown RBP18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 UBXN1Q04323 297 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 MCL1Q07820 350 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 BFSP1Q12934 665 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 SURF1Q15526 300 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 DCAF4L1Q3SXM0 396 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 SPECC1LQ69YQ0 1117 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 CATSPER4Q7RTX7 472 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 CELF4Q9BZC1 486 aaKnown RBP18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 VPS16Q9H269 839 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 SQORQ9Y6N5 450 aa18.23■□□□□ 0.51
SCAMP1-203ENST00000510030 GTPBP10A4D1E9 387 aaKnown RBP18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 ANKRD63C9JTQ0 380 aa18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 TLR3O15455 904 aaKnown RBP18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 AP5Z1O43299 807 aa18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 AFPP02771 609 aaKnown RBP18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 MCF2P10911 925 aa18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 PROZP22891 400 aa18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 ADSSP30520 456 aa18.22■□□□□ 0.51
SCAMP1-203ENST00000510030 GSDMDP57764 484 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms