RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 PRLRP16471 622 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 CDC27P30260 824 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 IFNA8P32881 189 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 SERPINB6P35237 376 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 IARSP41252 1262 aaKnown RBP9.36□□□□□ -0.91
C4orf46-202ENST00000508457 CLK3P49761 638 aaKnown RBP9.36□□□□□ -0.91
C4orf46-202ENST00000508457 ATP1A4Q13733 1029 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 COL19A1Q14993 1142 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 LRRC14Q15048 493 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 BLOC1S2Q6QNY1 142 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 TMEM151BQ8IW70 566 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 FAM13CQ8NE31 585 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 GATA6Q92908 595 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 LSG1Q9H089 658 aaKnown RBP9.36□□□□□ -0.91
C4orf46-202ENST00000508457 CCSER2Q9H7U1 834 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 PPP1R9AQ9ULJ8 1098 aa9.36□□□□□ -0.91
C4orf46-202ENST00000508457 ANKRD62A6NC57 917 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CAPN9O14815 690 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 MFAP3LO75121 409 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 TARSP26639 723 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 EPHB2P29323 1055 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 AP3M2P53677 418 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 PLS1Q14651 629 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 C15orf59Q2T9L4 293 aaPredicted RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 RBM44Q6ZP01 1051 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 ANKRD13AQ8IZ07 590 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 FAM9CQ8IZT9 166 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 GIMAP1Q8WWP7 306 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 HDAC2Q92769 488 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 PSKH2Q96QS6 385 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 NSRP1Q9H0G5 558 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 TMEM206Q9H813 350 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 VTA1Q9NP79 307 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 TXNDC9O14530 226 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 RASA1P20936 1047 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 IL6STP40189 918 aaPredicted RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CDK7P50613 346 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 EMP3P54852 163 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 ITIH4Q14624 930 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 SF3B4Q15427 424 aaKnown RBP eCLIP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 TMEM266Q2M3C6 531 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 ZNF746Q6NUN9 644 aaPredicted RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 NFRKBQ6P4R8 1299 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CCDC174Q6PII3 467 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 NLRP9Q7RTR0 991 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CAVIN3Q969G5 261 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 UTP4Q969X6 686 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CLK4Q9HAZ1 481 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 HAO1Q9UJM8 370 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 COQ6Q9Y2Z9 468 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 EPN1Q9Y6I3 576 aaPredicted RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 ARPC4-TTLL3A0A0A6YYG9 625 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 PSMD14O00487 310 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 SNPHO15079 494 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 IDH1O75874 414 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 FMR1Q06787 632 aaKnown RBP eCLIP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 KPNB1Q14974 876 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 SLC27A3Q5K4L6 730 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CHCHD4Q8N4Q1 142 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 ERP27Q96DN0 273 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 CYTH2Q99418 400 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 RNF38Q9H0F5 515 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 ECHDC1Q9NTX5 307 aa9.35□□□□□ -0.91
C4orf46-202ENST00000508457 RBM12Q9NTZ6 932 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 TYW1Q9NV66 732 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 INTS9Q9NV88 658 aaKnown RBP9.35□□□□□ -0.91
C4orf46-202ENST00000508457 PASKQ96RG2 1323 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 SRRM3A6NNA2 597 aaPredicted RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 SGTAO43765 313 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 KATNA1O75449 491 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 KRT36O76013 467 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 PFKFB1P16118 471 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 ETV3P41162 512 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 SYKP43405 635 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 PSMD6Q15008 389 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 SUZ12Q15022 739 aaKnown RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 TXNRD1Q16881 649 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 LRRC36Q1X8D7 754 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 C11orf96Q7Z7L8 435 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 KLHL7Q8IXQ5 586 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 FITM2Q8N6M3 262 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 ZBTB38Q8NAP3 1195 aaPredicted RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 LSM14AQ8ND56 463 aaKnown RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 DIS3LQ8TF46 1054 aaKnown RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 U2AF1L4Q8WU68 220 aaKnown RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 MS4A14Q96JA4 679 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 ASCC2Q9H1I8 757 aaPredicted RBP9.34□□□□□ -0.91
C4orf46-202ENST00000508457 STK39Q9UEW8 545 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 CLIC4Q9Y696 253 aa9.34□□□□□ -0.91
C4orf46-202ENST00000508457 FAM208AQ9UK61 1670 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms