RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 FAM98AQ8NCA5 519 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 SPATA31A6Q5VVP1 1343 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 MYPNQ86TC9 1320 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 OPA1O60313 960 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 HKR1P10072 659 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 FNDC3BQ53EP0 1204 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 PIK3R6Q5UE93 754 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 XYLT1Q86Y38 959 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 MKL1Q969V6 931 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 SRPK1Q96SB4 655 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 ZMAT4Q9H898 229 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 PCDHB6Q9Y5E3 794 aa6.37□□□□□ -1.39
TRAPPC13-209ENST00000508304 PIPSLA2A3N6 862 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 DIRC3C9JPN6 131 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 ELL2O00472 640 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 SEC24DO94855 1032 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 PCDH8O95206 1070 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 PAPD7Q5XG87 772 aaKnown RBP6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 BTNL9Q6UXG8 535 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 TAS1R1Q7RTX1 841 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 SYT12Q8IV01 421 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 CDYL2Q8N8U2 506 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 SIMC1Q8NDZ2 872 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 TEX101Q9BY14 249 aa6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 ALG13Q9NP73 1137 aaKnown RBP6.36□□□□□ -1.39
TRAPPC13-209ENST00000508304 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 NHLH2Q02577 135 aa6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 DRICH1Q6PGQ1 229 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 MSL3Q8N5Y2 521 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 CPEB3Q8NE35 698 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 CAVIN3Q969G5 261 aa6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 FDXACB1Q9BRP7 624 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 TOMM22Q9NS69 142 aa6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 INTS7Q9NVH2 962 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 OXSMQ9NWU1 459 aa6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 USP36Q9P275 1121 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-209ENST00000508304 PRR5-ARHGAP8B1AHC4 643 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 PTH2RP49190 550 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 GUCY1B3Q02153 619 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 DUSP2Q05923 314 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 ERCC6LQ2NKX8 1250 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 LILRB2Q8N423 598 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 NELL1Q92832 810 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 ADAM2Q99965 735 aa6.34□□□□□ -1.39
TRAPPC13-209ENST00000508304 MARCH11A6NNE9 402 aa6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 PFKMP08237 780 aa6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 HSP90B1P14625 803 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 BLOC1S1P78537 153 aa6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 ABHD17BQ5VST6 288 aa6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 CDCA2Q69YH5 1023 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 RSAD1Q9HA92 442 aa6.33□□□□□ -1.4
TRAPPC13-209ENST00000508304 A0A1W2PR48 441 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 UNC119BA6NIH7 251 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 JMJD7P0C870 316 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 CD40P25942 277 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 CXCR5P32302 372 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 FLT3P36888 993 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 ELLP55199 621 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 TP53BP2Q13625 1128 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 LRRC32Q14392 662 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 ZBTB41Q5SVQ8 909 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 UBE2R2Q712K3 238 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 BOLLQ8N9W6 283 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 OR10H5Q8NGA6 315 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 ORAI3Q9BRQ5 295 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 LRFN3Q9BTN0 628 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 SPON1Q9HCB6 807 aa6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 H2AFY2Q9P0M6 372 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 COL11A2P13942 1736 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-209ENST00000508304 ESRRBO95718 433 aa6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 ERBB2P04626 1255 aa6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 EGR2P11161 476 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 ATP2A2P16615 1042 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 GPR15P49685 360 aa6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 PMFBP1Q8TBY8 1022 aa6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 ASB10Q8WXI3 467 aa6.31□□□□□ -1.4
TRAPPC13-209ENST00000508304 SDSP20132 328 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 PLA2G5P39877 138 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 MPLP40238 635 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 CCDC178Q5BJE1 867 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 ESPNLQ6ZVH7 1005 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 GAB3Q8WWW8 586 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 USP18Q9UMW8 372 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 FRMD4BQ9Y2L6 1034 aa6.3□□□□□ -1.4
TRAPPC13-209ENST00000508304 ST20-MTHFSA0A0A6YYL1 179 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 NRP2O60462 931 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 SPDEFO95238 335 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 C1RP00736 705 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 HLA-DOAP06340 250 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 SPATA31D3P0C874 917 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 RBP3P10745 1247 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 ITGB6P18564 788 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 MGAT1P26572 445 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 KRTAP10-9P60411 292 aa6.29□□□□□ -1.4
TRAPPC13-209ENST00000508304 APBA1Q02410 837 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms