RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 ODC1P11926 461 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 PCSK1P29120 753 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 FXR2P51116 673 aaKnown RBP eCLIP10.15□□□□□ -0.78
NEK1-203ENST00000507142 BCAR1P56945 870 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 PTPROQ16827 1216 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 MOCS2O96007 188 aaPredicted RBP10.15□□□□□ -0.78
NEK1-203ENST00000507142 UQCRHP07919 91 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 KRT10P13645 584 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 NAMPTP43490 491 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 MRPS6P82932 125 aaKnown RBP10.15□□□□□ -0.78
NEK1-203ENST00000507142 CDO1Q16878 200 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 ZC2HC1CQ53FD0 456 aaPredicted RBP10.15□□□□□ -0.78
NEK1-203ENST00000507142 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
NEK1-203ENST00000507142 ABI2Q9NYB9 513 aaPredicted RBP10.15□□□□□ -0.78
NEK1-203ENST00000507142 CASTOR2A6NHX0 329 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 TBXAS1P24557 533 aaPredicted RBP10.15□□□□□ -0.79
NEK1-203ENST00000507142 TAF6P49848 677 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 ZNF365Q70YC5 407 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 NIPA1Q7RTP0 329 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 TADA2BQ86TJ2 420 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 KSR1Q8IVT5 923 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.15□□□□□ -0.79
NEK1-203ENST00000507142 ZNF653Q96CK0 615 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 PAWRQ96IZ0 340 aaKnown RBP10.15□□□□□ -0.79
NEK1-203ENST00000507142 CTAGE9A4FU28 777 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 SLC26A4O43511 780 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 TRIM49P0CI25 452 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 TRIM49CP0CI26 452 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 ARL4AP40617 200 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 SNX17Q15036 470 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 CTXN3Q4LDR2 81 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 SEZ6Q53EL9 994 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 SPECC1LQ69YQ0 1117 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 PEX26Q7Z412 305 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 TMTC1Q8IUR5 882 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 C4orf19Q8IY42 314 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 TRIM11Q96F44 468 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.79
NEK1-203ENST00000507142 MYO1FO00160 1098 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 IRF1P10914 325 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 ACCSLQ4AC99 568 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 FBXO46Q6PJ61 603 aaPredicted RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 LRRC31Q6UY01 552 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 SYCE1Q8N0S2 351 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 OR8K1Q8NGG5 319 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 FBXL21Q9UKT6 434 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 SH3BP1Q9Y3L3 701 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 EZRP15311 586 aaKnown RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 ABRAQ8N0Z2 381 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 STKLD1Q8NE28 680 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 GABPB2Q8TAK5 448 aaPredicted RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 NCAPGQ9BPX3 1015 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 BCCIPQ9P287 314 aaKnown RBP eCLIP10.14□□□□□ -0.79
NEK1-203ENST00000507142 PLA2G6O60733 806 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 FDPSP14324 419 aaKnown RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 BTNL9Q6UXG8 535 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 PASD1Q8IV76 773 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 NAP1L3Q99457 506 aaPredicted RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 UNC93B1Q9H1C4 597 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 MFSD1Q9H3U5 465 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 THAP9Q9H5L6 903 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 MED24O75448 989 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 ATP2A2P16615 1042 aaKnown RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 ELAVL2Q12926 359 aaKnown RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 CCDC89Q8N998 374 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 HPS3Q969F9 1004 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 HINFPQ9BQA5 517 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 XPO4Q9C0E2 1151 aaKnown RBP10.14□□□□□ -0.79
NEK1-203ENST00000507142 CERS4Q9HA82 394 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 C17orf75Q9HAS0 396 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 DNAI1Q9UI46 699 aa10.14□□□□□ -0.79
NEK1-203ENST00000507142 NEMP1O14524 444 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 APOEP02649 317 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 H2AFZP0C0S5 128 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 MYZAPP0CAP1 466 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 PPP1R2P3Q6NXS1 205 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CASC4Q6P4E1 433 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 TOGARAM2Q6ZUX3 1019 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 H2AFVQ71UI9 128 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 DYDC1Q8WWB3 177 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 SECISBP2LQ93073 1101 aaKnown RBP10.13□□□□□ -0.79
NEK1-203ENST00000507142 FBXO2Q9UK22 296 aaPredicted RBP10.13□□□□□ -0.79
NEK1-203ENST00000507142 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
NEK1-203ENST00000507142 EMSYQ7Z589 1322 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 TRIM49BA6NDI0 452 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 ADKP55263 362 aaKnown RBP10.13□□□□□ -0.79
NEK1-203ENST00000507142 SGO2Q562F6 1265 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CES5AQ6NT32 575 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 CCNYQ8ND76 341 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 ZNF558Q96NG5 402 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 NGRNQ9NPE2 291 aaKnown RBP10.13□□□□□ -0.79
NEK1-203ENST00000507142 SALL3Q9BXA9 1300 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 HMBSP08397 361 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 LCP1P13796 627 aa10.13□□□□□ -0.79
NEK1-203ENST00000507142 SELPP16109 830 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms