RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZBTB46Q86UZ6 589 aa7.53□□□□□ -1.2
NIPBL-205ENST00000505998 CIR1Q86X95 450 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-205ENST00000505998 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
NIPBL-205ENST00000505998 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
NIPBL-205ENST00000505998 CARMIL1Q5VZK9 1371 aa7.53□□□□□ -1.2
NIPBL-205ENST00000505998 MTSS1O43312 755 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 KRT85P78386 507 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 UBE3CQ15386 1083 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 MUM1L1Q5H9M0 696 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 FAM180AQ6UWF9 173 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 JADE3Q92613 823 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 CHMP4CQ96CF2 233 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 GPHA2Q96T91 129 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 SLC13A1Q9BZW2 595 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA2Q9Y5H1 932 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 KIAA0586Q9BVV6 1533 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 UGGT2Q9NYU1 1516 aa7.52□□□□□ -1.21
NIPBL-205ENST00000505998 IQGAP2Q13576 1575 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 SAMD9Q5K651 1589 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 GOLGA3Q08378 1498 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 A0A1W2PRX2 142 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 FZD9O00144 591 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA12O60330 932 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 ALDH1L1O75891 902 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 ITGB3P05106 788 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 CTSSP25774 331 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 RPS19P39019 145 aaKnown RBP7.51□□□□□ -1.21
NIPBL-205ENST00000505998 NEK2P51955 445 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 ADAM8P78325 824 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 MALLQ13021 153 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 ABHD15Q6UXT9 468 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 MSL3Q8N5Y2 521 aaKnown RBP7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.51□□□□□ -1.21
NIPBL-205ENST00000505998 CXorf38Q8TB03 319 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 SNX33Q8WV41 574 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 RIN2Q8WYP3 895 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-205ENST00000505998 ADI1Q9BV57 179 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PLA2G12BQ9BX93 195 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 NELFAQ9H3P2 528 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 GREM2Q9H772 168 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 TLR9Q9NR96 1032 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA9Q9Y5G4 932 aaKnown RBP7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA8Q9Y5G5 932 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA7Q9Y5G6 932 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA6Q9Y5G7 932 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 PCDHGA3Q9Y5H0 932 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 RPTORQ8N122 1335 aa7.51□□□□□ -1.21
NIPBL-205ENST00000505998 NRP1O14786 923 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 GPR42O15529 346 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 AKR1B10O60218 316 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 PHF2O75151 1096 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 SNUPNO95149 360 aaKnown RBP7.5□□□□□ -1.21
NIPBL-205ENST00000505998 WNT3AP56704 352 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 PLP2Q04941 152 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 SAFB2Q14151 953 aaKnown RBP eCLIP7.5□□□□□ -1.21
NIPBL-205ENST00000505998 PLEKHG6Q3KR16 790 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 C19orf54Q5BKX5 351 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 EFCAB2Q5VUJ9 269 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 ADGRE4PQ86SQ3 457 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 GPR135Q8IZ08 494 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 CMTM4Q8IZR5 234 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 GPR156Q8NFN8 814 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 RELTQ969Z4 430 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 OR14A2Q96R54 314 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 RBM15Q96T37 977 aaKnown RBP eCLIP7.5□□□□□ -1.21
NIPBL-205ENST00000505998 IL23AQ9NPF7 189 aa7.5□□□□□ -1.21
NIPBL-205ENST00000505998 NPEPPSP55786 919 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 DUSP2Q05923 314 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 TTF1Q15361 905 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-205ENST00000505998 TCTN3Q6NUS6 607 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 TEKT5Q96M29 485 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 SSBP3Q9BWW4 388 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-205ENST00000505998 AGO3Q9H9G7 860 aaKnown RBP7.49□□□□□ -1.21
NIPBL-205ENST00000505998 DMRT3Q9NQL9 472 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 AASDHPPTQ9NRN7 309 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 RBM12Q9NTZ6 932 aaKnown RBP7.49□□□□□ -1.21
NIPBL-205ENST00000505998 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 ZFR2Q9UPR6 939 aaKnown RBP7.49□□□□□ -1.21
NIPBL-205ENST00000505998 DNM3Q9UQ16 869 aa7.49□□□□□ -1.21
NIPBL-205ENST00000505998 UBE2QL1A1L167 161 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 NDUFS2O75306 463 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 S100BP04271 92 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-205ENST00000505998 GSPT1P15170 499 aaKnown RBP7.48□□□□□ -1.21
NIPBL-205ENST00000505998 C5AR1P21730 350 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 ADSLP30566 484 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-205ENST00000505998 MCAMP43121 646 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 RECQLP46063 649 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-205ENST00000505998 DUSP8Q13202 625 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 GRM7Q14831 915 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 ODR4Q5SWX8 454 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 GJC2Q5T442 439 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-205ENST00000505998 TMEM176AQ96HP8 235 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 TCF25Q9BQ70 676 aa7.48□□□□□ -1.21
NIPBL-205ENST00000505998 EFCAB5A4FU69 1503 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 K7ESM1 405 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 FOXS1O43638 330 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 FOXD2O60548 495 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-205ENST00000505998 RAD17O75943 681 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 GYPEP15421 78 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms