RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 A0A1W2PRX2 142 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 UBE2QL1A1L167 161 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 PMS2P1A4D2B8 440 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 PHF2O75151 1096 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 IL33O95760 270 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 CT47B1P0C2W7 299 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 PF4V1P10720 104 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 CASRP41180 1078 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 SEPT2Q15019 361 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 NFE2Q16621 373 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 UAP1L1Q3KQV9 507 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 TMEM240Q5SV17 173 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 LILRA3Q8N6C8 439 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 GIMAP8Q8ND71 665 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 OR5M3Q8NGP4 307 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 JPH3Q8WXH2 748 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 PLA2G12BQ9BX93 195 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 RHOBTB2Q9BYZ6 727 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 IL23AQ9NPF7 189 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 TCEAL9Q9UHQ7 104 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 LIMCH1Q9UPQ0 1083 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 GIT1Q9Y2X7 761 aa5.34□□□□□ -1.55
TOPBP1-204ENST00000505804 E2F8A0AVK6 867 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 GPR42O15529 346 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 MTSS1O43312 755 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 EDNRBP24530 442 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 SLC16A1P53985 500 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 ADKP55263 362 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 NPEPPSP55786 919 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 WNT3AP56704 352 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 DUSP2Q05923 314 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 DUSP8Q13202 625 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 GRM7Q14831 915 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 PPP2R5AQ15172 486 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 FBLN7Q53RD9 439 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 TCTN3Q6NUS6 607 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 GLB1LQ6UWU2 654 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 TPH2Q8IWU9 490 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 MIER2Q8N344 545 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 TMEM176AQ96HP8 235 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 OR14A2Q96R54 314 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 SSBP3Q9BWW4 388 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 CDH19Q9H159 772 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 GPRC5DQ9NZD1 345 aa5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 SAP30BPQ9UHR5 308 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-204ENST00000505804 CCDC154A6NI56 674 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ADCY6O43306 1168 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 HTRA2O43464 458 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 FOXS1O43638 330 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ITGA10O75578 1167 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ECHS1P30084 290 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 WASP42768 502 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 PER3P56645 1201 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 MGAT2Q10469 447 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 NFIXQ14938 502 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 MST1LQ2TV78 715 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 CHPFQ8IZ52 775 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ZNF480Q8WV37 535 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 RBM15Q96T37 977 aaKnown RBP eCLIP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 TCF25Q9BQ70 676 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ENKD1Q9H0I2 346 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 NELFAQ9H3P2 528 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 PLA2G3Q9NZ20 509 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 TRPS1Q9UHF7 1281 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 NOB1Q9ULX3 412 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ZFR2Q9UPR6 939 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 IPPQ9Y573 584 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 PCDHA13Q9Y5I0 950 aa5.32□□□□□ -1.56
TOPBP1-204ENST00000505804 ZMYM3Q14202 1370 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 NRP1O14786 923 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 STC2O76061 302 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 SCGB1D2O95969 90 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 GASTP01350 101 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 ITGB3P05106 788 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 HMGB1P09429 215 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 GYPEP15421 78 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 PDCP20941 246 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 RPS19P39019 145 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 SLC6A9P48067 706 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 IL10RAQ13651 578 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 C3orf36Q3SXR2 165 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 FAM111BQ6SJ93 734 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 FMNL3Q8IVF7 1028 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 FUKQ8N0W3 1084 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 PQLC1Q8N2U9 271 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 FBXO18Q8NFZ0 1043 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 OR7D4Q8NG98 312 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 MDM1Q8TC05 714 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 STON2Q8WXE9 905 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 TSR2Q969E8 191 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 CAMKK2Q96RR4 588 aa5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 UHRF1Q96T88 793 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-204ENST00000505804 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms