RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 STK39Q9UEW8 545 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 NUMBLQ9Y6R0 609 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 COL4A3Q01955 1670 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 LILRB3O75022 631 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 ZNF623O75123 536 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 TDP2O95551 362 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 SRGAP2CP0DJJ0 459 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 LAMP2P13473 410 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 ITGA4P13612 1032 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 CPA1P15085 419 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 GLULP15104 373 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 NLRP5P59047 1200 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 CDC42EP1Q00587 391 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 UBXN2BQ14CS0 331 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 PHLDB3Q6NSJ2 640 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 CCDC148Q8NFR7 591 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 BICD2Q8TD16 824 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 SLC5A5Q92911 643 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 TMEM143Q96AN5 459 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 ZNF707Q96C28 371 aaPredicted RBP7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 GAD1Q99259 594 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 RIT2Q99578 217 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 DLGAP2Q9P1A6 1054 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 KANSL3Q9P2N6 904 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 SSX2IPQ9Y2D8 614 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 HES2Q9Y543 173 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 COL4A3BPQ9Y5P4 624 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 CNTNAP2Q9UHC6 1331 aa7.72□□□□□ -1.17
NPIPB3-203ENST00000504841 DOCK8Q8NF50 2099 aa7.71□□□□□ -1.17
NPIPB3-203ENST00000504841 IGKV6-21A0A0C4DH24 114 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CCDC196A0A1B0GTZ2 297 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 LAMTOR5O43504 91 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 TGM5O43548 720 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 GAS2O43903 313 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 NR1I2O75469 434 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 ERLIN2O94905 339 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 STBD1O95210 358 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 RPL17P18621 184 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 FSHRP23945 695 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 SCNN1GP51170 649 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 NPEPPSP55786 919 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 GPC5P78333 572 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 NTHL1P78549 312 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 EXOSC10Q01780 885 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 SNW1Q13573 536 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 HTR4Q13639 388 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 UBXN11Q5T124 520 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 FUT10Q6P4F1 479 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CYP26C1Q6V0L0 522 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 MAMSTRQ6ZN01 415 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 ANO5Q75V66 913 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 COLGALT2Q8IYK4 626 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 SUMF1Q8NBK3 374 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 RDM1Q8NG50 284 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 TBCKQ8TEA7 893 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 PSPC1Q8WXF1 523 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 SLC7A3Q8WY07 619 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 RABGGTAQ92696 567 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 NXPE3Q969Y0 559 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CPB2Q96IY4 423 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CEP170P1Q96L14 293 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CEP89Q96ST8 783 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 JPH2Q9BR39 696 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 RPP25Q9BUL9 199 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 SLC26A6Q9BXS9 759 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 EIF2AQ9BY44 585 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 BCO2Q9BYV7 579 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 NT5C3AQ9H0P0 336 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 MINDY3Q9H8M7 445 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 IFT122Q9HBG6 1241 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 DLL3Q9NYJ7 618 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CDV3Q9UKY7 258 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 POLIQ9UNA4 740 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 CACNA1AO00555 2505 aa7.71□□□□□ -1.18
NPIPB3-203ENST00000504841 ARL5CA6NH57 179 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 ANHXE9PGG2 379 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 PRPF3O43395 683 aaKnown RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 EDIL3O43854 480 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 MAFO75444 373 aaPredicted RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 ZMYND10O75800 440 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 PSMD10O75832 226 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 NCLP19338 710 aaKnown RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 CD72P21854 359 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 RCAN1P53805 252 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 PSMC5P62195 406 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 IRX6P78412 446 aaPredicted RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 DSG1Q02413 1049 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 CSTF1Q05048 431 aaKnown RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 LAMTOR4Q0VGL1 99 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 MLF2Q15773 248 aaPredicted RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 VARS2Q5ST30 1063 aaKnown RBP7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 LIN9Q5TKA1 542 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 TSSK4Q6SA08 328 aa7.7□□□□□ -1.18
NPIPB3-203ENST00000504841 PRSS55Q6UWB4 352 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms