RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 VCAM1P19320 739 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM21P19474 475 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 HSPA9P38646 679 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TBC1D8BQ0IIM8 1120 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NFIAQ12857 509 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NAA35Q5VZE5 725 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SND1Q7KZF4 910 aaKnown RBP eCLIP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PHLDB2Q86SQ0 1253 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC84Q86UT8 332 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SPATA24Q86W54 205 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TRMT44Q8IYL2 757 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 HS6ST3Q8IZP7 471 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TMC2Q8TDI7 906 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NUP205Q92621 2012 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ARMC5Q96C12 935 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ASNSD1Q9NWL6 643 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 VWA3AA6NCI4 1184 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DCAF8L1A6NGE4 600 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C2orf81A6NN90 581 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GREM1O60565 184 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NOL4O94818 638 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SUN1O94901 812 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 A1BGP04217 495 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ADSSP30520 456 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PCK1P35558 622 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GABRB2P47870 512 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GCGRP47871 477 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CUL1Q13616 776 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM29Q14134 588 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PPP1R7Q15435 360 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SPA17Q15506 151 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ASPRV1Q53RT3 343 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF569Q5MCW4 686 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 AGBL2Q5U5Z8 902 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PRPF40BQ6NWY9 871 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C7orf31Q8N865 590 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PDCD7Q8N8D1 485 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GSTCDQ8NEC7 633 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SPDYE1Q8NFV5 336 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 HELBQ8NG08 1087 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C17orf50Q8WW18 174 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ACSBG1Q96GR2 724 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C1QTNF3Q9BXJ4 246 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NFE2L3Q9Y4A8 694 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 USP3Q9Y6I4 520 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 LRRIQ3A6PVS8 624 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 O00370 1275 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SMARCA5O60264 1052 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GZMAP12544 262 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ACO1P21399 889 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ATP5DP30049 168 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TUBA4AP68366 448 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NONOQ15233 471 aaKnown RBP eCLIP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 INAQ16352 499 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 USP41Q3LFD5 358 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 FOXD4L6Q3SYB3 417 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CWF19L1Q69YN2 538 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ARMCX5Q6P1M9 558 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 FOXD4L3Q6VB84 417 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NCAPG2Q86XI2 1143 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF280CQ8ND82 737 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DNERQ8NFT8 737 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PPP2R3CQ969Q6 453 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MFSD14AQ96MC6 490 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CATSPER2Q96P56 530 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PLEKHG4BQ96PX9 1271 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ZIC5Q96T25 663 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TLE6Q9H808 572 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PARVBQ9HBI1 364 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DDX4Q9NQI0 724 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 XPNPEP1Q9NQW7 623 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ST7Q9NRC1 585 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PAG1Q9NWQ8 432 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DKK3Q9UBP4 350 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 HPCAL4Q9UM19 191 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TRPC6Q9Y210 931 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MYH9P35579 1960 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 A0A0G2JS52 829 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 WNT7AO00755 349 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CETN3O15182 167 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SURF6O75683 361 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ONECUT2O95948 504 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 IFIT2P09913 472 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PDHBP11177 359 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 S100A1P23297 94 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MDH1P40925 334 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PEX5P50542 639 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PRMT2P55345 433 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DSC1Q08554 894 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 LRRC24Q50LG9 513 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MORN1Q5T089 497 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GPAT2Q6NUI2 795 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C8orf74Q6P047 294 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ZPBP2Q6X784 338 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MYOCDQ8IZQ8 938 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PDILTQ8N807 584 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TEKT4Q8WW24 435 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 LMLNQ96KR4 655 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SCLT1Q96NL6 688 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms