RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 LPPQ93052 612 aa19.6■□□□□ 0.73
CCHCR1-216ENST00000502557 ACO2Q99798 780 aaKnown RBP19.6■□□□□ 0.73
CCHCR1-216ENST00000502557 TARS2Q9BW92 718 aaKnown RBP19.6■□□□□ 0.73
CCHCR1-216ENST00000502557 MRPL4Q9BYD3 311 aaKnown RBP19.6■□□□□ 0.73
CCHCR1-216ENST00000502557 TMEM265A0A087WTH1 108 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 MEIS3P2A8K0S8 358 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 SCP2P22307 547 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 GTF2BQ00403 316 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 TAP1Q03518 808 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 SNW1Q13573 536 aaKnown RBP19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 CLLU1OSQ5K130 101 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 PPP2R2DQ66LE6 453 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 ZNF720Q7Z2F6 126 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 SLC17A8Q8NDX2 589 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 CNNM3Q8NE01 707 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 TTYH1Q9H313 450 aaPredicted RBP19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 ST6GALNAC4Q9H4F1 302 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 SLC28A3Q9HAS3 691 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 OLFML3Q9NRN5 406 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 TBC1D7Q9P0N9 293 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 TBX20Q9UMR3 447 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 TNFSF13BQ9Y275 285 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 IPPQ9Y573 584 aa19.59■□□□□ 0.73
CCHCR1-216ENST00000502557 TRIOBPQ9H2D6 2365 aa19.58■□□□□ 0.73
CCHCR1-216ENST00000502557 LINC01553A4QN01 128 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 HOXA2O43364 376 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 PAN2Q504Q3 1202 aaKnown RBP19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 ZC2HC1CQ53FD0 456 aaPredicted RBP19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 AGMOQ6ZNB7 445 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 UNC13DQ70J99 1090 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 SPRED2Q7Z698 418 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 CMTR2Q8IYT2 770 aaKnown RBP19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 PGBD4Q96DM1 585 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 CASD1Q96PB1 797 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 STRA6Q9BX79 667 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 FGFBP2Q9BYJ0 223 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 TMEM117Q9H0C3 514 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 RNF39Q9H2S5 420 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 MRPL44Q9H9J2 332 aaKnown RBP19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 PTPRHQ9HD43 1115 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 HES2Q9Y543 173 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 LOXHD1Q8IVV2 1947 aa19.58■□□□□ 0.72
CCHCR1-216ENST00000502557 PVALEFA0A1B0GWK0 134 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 TBKBP1A7MCY6 615 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 GTPBP6O43824 516 aaPredicted RBP19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 PPP1R37O75864 691 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 BTG3Q14201 252 aaPredicted RBP19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 ZNF697Q5TEC3 545 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 FIBCD1Q8N539 461 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 HPS3Q969F9 1004 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 ADPGKQ9BRR6 497 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 TRIM6Q9C030 488 aaPredicted RBP19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 NXF3Q9H4D5 531 aaKnown RBP19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 ZNF576Q9H609 170 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 MICAL3Q7RTP6 2002 aa19.57■□□□□ 0.72
CCHCR1-216ENST00000502557 COL4A6Q14031 1691 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 ABLIM1O14639 778 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 KLRC4O43908 158 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 PRR29P0C7W0 189 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 MYBP10242 640 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 ITGA4P13612 1032 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 PROZP22891 400 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 ABCD1P33897 745 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 CASP5P51878 434 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 EHHADHQ08426 723 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 ZPBP2Q6X784 338 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 Q7L0L9 218 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 MAP4K3Q8IVH8 894 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 HELQQ8TDG4 1101 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 HVCN1Q96D96 273 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 CDT1Q9H211 546 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 SEMA6BQ9H3T3 888 aa19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 MRPL42Q9Y6G3 142 aaKnown RBP19.56■□□□□ 0.72
CCHCR1-216ENST00000502557 PRPF40AO75400 957 aaKnown RBP19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 NR1I2O75469 434 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 OFD1O75665 1012 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 TOM1L1O75674 476 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 GCNT3O95395 438 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 PIGRP01833 764 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 MYL1P05976 194 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 LINC00271P0C7V0 271 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 DCAF4L1Q3SXM0 396 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 ZNF568Q3ZCX4 644 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 MPZL3Q6UWV2 235 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 ABI1Q8IZP0 508 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 BICD1Q96G01 975 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 ZBTB45Q96K62 511 aaPredicted RBP19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 APOL6Q9BWW8 343 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 RSAD1Q9HA92 442 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 PTPRSQ13332 1948 aa19.55■□□□□ 0.72
CCHCR1-216ENST00000502557 AKAP5P24588 427 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 LIG4P49917 911 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 ERVK-21P61565 698 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 UBE2HP62256 183 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 KCNA1Q09470 495 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 DPYDQ12882 1025 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 FAM26FQ5R3K3 315 aa19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 L1TD1Q5T7N2 865 aaKnown RBP19.54■□□□□ 0.72
CCHCR1-216ENST00000502557 KANK3Q6NY19 840 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms