RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 DMAP1Q9NPF5 467 aaPredicted RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 PLCB1Q9NQ66 1216 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 FGFR1OP2Q9NVK5 253 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 MAFBQ9Y5Q3 323 aaPredicted RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 SYNRGQ9UMZ2 1314 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYO5AQ9Y4I1 1855 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 COL1A1P02452 1464 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIM75PA6NK02 468 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TCP10L2B9ZVM9 353 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 PDLIM1O00151 329 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SART1O43290 800 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 MMEP08473 750 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 HSD3B2P26439 372 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 CTNNA1P35221 906 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLC16A2P36021 539 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRAPPC10P48553 1259 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 NAPAP54920 295 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 MRPS35P82673 323 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMED1Q13445 227 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 C12orf60Q5U649 245 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ERAP2Q6P179 960 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 RFX8Q6ZV50 586 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SESTD1Q86VW0 696 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SGMS1Q86VZ5 419 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 IRF2BP1Q8IU81 584 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 CNGA4Q8IV77 575 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 REM2Q8IYK8 340 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SRBD1Q8N5C6 995 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 UBLCP1Q8WVY7 318 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 CTNNBL1Q8WYA6 563 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TEKT1Q969V4 418 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 CLMNQ96JQ2 1002 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 FAM129AQ9BZQ8 928 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SEC63Q9UGP8 760 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATP6V0A2Q9Y487 856 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMEM247A6NEH6 219 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 GCOM1H8Y6P7 765 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ACTN4O43707 911 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 USO1O60763 962 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 INMTO95050 263 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 FTCDO95954 541 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 HLA-DOAP06340 250 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 VIMP08670 466 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYZAPP0CAP1 466 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 HDAC4P56524 1084 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TUBB4BP68371 445 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 BNIP1Q12981 228 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 LSAMPQ13449 338 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SHROOM1Q2M3G4 852 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 KHDC1Q4VXA5 237 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMEM214Q6NUQ4 689 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZC3H18Q86VM9 953 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TREML1Q86YW5 311 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 RELL1Q8IUW5 271 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SP8Q8IXZ3 490 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 RIBC1Q8N443 379 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 FAM13CQ8NE31 585 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ASAP3Q8TDY4 903 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 DYDC1Q8WWB3 177 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 DNAJC9Q8WXX5 260 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ERP27Q96DN0 273 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 DYDC2Q96IM9 177 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF333Q96JL9 665 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 PURBQ96QR8 312 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SELENOSQ9BQE4 189 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 SPATA16Q9BXB7 569 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 HAUS4Q9H6D7 363 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TDRD3Q9H7E2 651 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF277Q9NRM2 450 aaPredicted RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 DDX18Q9NVP1 670 aaKnown RBP6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 CLIC5Q9NZA1 410 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 TAGLN3Q9UI15 199 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 N6AMT1Q9Y5N5 214 aa6.2□□□□□ -1.42
SOX2-OT-218ENST00000498731 A6NCN8 305 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 KLRF2D3W0D1 207 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLC26A4O43511 780 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 AKR1B10O60218 316 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 LUC7L3O95232 432 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GDF11O95390 407 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GH1P01241 217 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 MMP1P03956 469 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ITGA2BP08514 1039 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PAEPP09466 180 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYCLP1P12525 358 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 EPHB2P29323 1055 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SNAP25P60880 206 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 COPS2P61201 443 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CKAP4Q07065 602 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 NFIAQ12857 509 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 NTRK3Q16288 839 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PAOXQ6QHF9 649 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TAS1R3Q7RTX0 852 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DAAM2Q86T65 1068 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 MCF2L2Q86YR7 1114 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMCO5AQ8N6Q1 288 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATP11CQ8NB49 1132 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SHKBP1Q8TBC3 707 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms