RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 SPIRE1Q08AE8 756 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 UBXN11Q5T124 520 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 ASTLQ6HA08 431 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 C12orf76Q8N812 135 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 BCL7CQ8WUZ0 217 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 AUTS2Q8WXX7 1259 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 STAMQ92783 540 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 NXPE3Q969Y0 559 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 RPS6KC1Q96S38 1066 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 MINDY3Q9H8M7 445 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 IGSF9Q9P2J2 1179 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 PCDHA12Q9UN75 941 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 GIT1Q9Y2X7 761 aa18.76■□□□□ 0.59
TRAPPC3-207ENST00000497251 SLITRK3O94933 977 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 PAPLNO95428 1278 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 LONRF3Q496Y0 759 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 TMC5Q6UXY8 1006 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 COLGALT2Q8IYK4 626 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 ZNF579Q8NAF0 562 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 HSD17B14Q9BPX1 270 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 HERC2P3Q9BVR0 1158 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 COLEC11Q9BWP8 271 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 VN1R3Q9BXE9 311 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 CSRNP2Q9H175 543 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 MFSD1Q9H3U5 465 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 RXFP1Q9HBX9 757 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 RGL1Q9NZL6 768 aa18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 WRAP73Q9P2S5 460 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-207ENST00000497251 KRT2P35908 639 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 CREMQ03060 361 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 DSC1Q08554 894 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 TDGQ13569 410 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 NCAPH2Q6IBW4 605 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 TPH2Q8IWU9 490 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 SMG8Q8ND04 991 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 DYDC2Q96IM9 177 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 PLEKHA4Q9H4M7 779 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 ORC3Q9UBD5 711 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 IPPQ9Y573 584 aa18.74■□□□□ 0.59
TRAPPC3-207ENST00000497251 ARL5CA6NH57 179 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 GFRA3O60609 400 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 TSPAN1O60635 241 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 EFEMP2O95967 443 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 POMCP01189 267 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 RNF168Q8IYW5 571 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 PHOX2BQ99453 314 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 EIF2AK1Q9BQI3 630 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 LARP6Q9BRS8 491 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 TRIM6Q9C030 488 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 CDH22Q9UJ99 828 aa18.73■□□□□ 0.59
TRAPPC3-207ENST00000497251 INO80B-WBP1J3KQ70 363 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 GLUD1P00367 558 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 WEE2P0C1S8 567 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 ARL2P36404 184 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 GLUD2P49448 558 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 DSG1Q02413 1049 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 CTTNQ14247 550 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 KIAA0319Q5VV43 1072 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 PRIMPOLQ96LW4 560 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 CCDC43Q96MW1 224 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 RTP3Q9BQQ7 232 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 WDR6Q9NNW5 1121 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 CHST7Q9NS84 486 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 FNIP2Q9P278 1114 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 TPCN1Q9ULQ1 816 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 DUSP12Q9UNI6 340 aa18.72■□□□□ 0.59
TRAPPC3-207ENST00000497251 TEX28O15482 410 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 B4GALT3O60512 393 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 PDGFBP01127 241 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 ASGR2P07307 311 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 NBL1P41271 181 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 OR1G1P47890 313 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 AK2P54819 239 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 CYP4A11Q02928 519 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 CALCRLQ16602 461 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 OXER1Q8TDS5 423 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 TNFRSF25Q93038 417 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 GAD1Q99259 594 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 KCNK12Q9HB15 430 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 XPNPEP1Q9NQW7 623 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 MARCH5Q9NX47 278 aa18.71■□□□□ 0.59
TRAPPC3-207ENST00000497251 USP34Q70CQ2 3546 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 A0A1B0GUA9 196 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 H0Y858 1186 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 SSBP05455 408 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 AFF1P51825 1210 aaKnown RBP18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 MBTD1Q05BQ5 628 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 USP41Q3LFD5 358 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 SLC27A1Q6PCB7 646 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 TMEM105Q8N8V8 129 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 TTC12Q9H892 705 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 MAN1C1Q9NR34 630 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 ZDHHC7Q9NXF8 308 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 EPS15L1Q9UBC2 864 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 WNT16Q9UBV4 365 aa18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 ZFP37Q9Y6Q3 630 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC3-207ENST00000497251 CCDC195A0A1B0GUA6 201 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms