RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 DACT1Q9NYF0 836 aa6.72□□□□□ -1.33
HMGCL-206ENST00000496907 VPS9D1Q9Y2B5 631 aa6.72□□□□□ -1.33
HMGCL-206ENST00000496907 LCTP09848 1927 aa6.72□□□□□ -1.33
HMGCL-206ENST00000496907 FAM208BQ5VWN6 2430 aa6.71□□□□□ -1.33
HMGCL-206ENST00000496907 E9PMD0 336 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 K7ERI5 159 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 POLR2DO15514 142 aaKnown RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 USO1O60763 962 aaKnown RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 TBCAO75347 108 aaKnown RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 RPS6KA5O75582 802 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 FAM13AO94988 1023 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ZNF202O95125 648 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 SMC2O95347 1197 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 CXCL10P02778 98 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 PLS3P13797 630 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 GPC3P51654 580 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 PTENP60484 403 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ZNF200P98182 395 aaPredicted RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 LAMTOR4Q0VGL1 99 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 TCF15Q12870 199 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 KARSQ15046 597 aaKnown RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ST3GAL2Q16842 350 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ZNF618Q5T7W0 954 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 FAM102BQ5T8I3 360 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 CNKSR3Q6P9H4 555 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 SHC4Q6S5L8 630 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ASCL5Q7RTU5 278 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 RHPN2Q8IUC4 686 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 HACE1Q8IYU2 909 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 FSIP1Q8NA03 581 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 CNNM3Q8NE01 707 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 DEPTORQ8TB45 409 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 NLRP7Q8WX94 980 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ATOH1Q92858 354 aaPredicted RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 HVCN1Q96D96 273 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 CCDC51Q96ER9 411 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 C7orf25Q9BPX7 421 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 FTOQ9C0B1 505 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 FAM49AQ9H0Q0 323 aaPredicted RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 PARVGQ9HBI0 331 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 PRMT7Q9NVM4 692 aaPredicted RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 KBTBD4Q9NVX7 518 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 WRAP73Q9P2S5 460 aaPredicted RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 HPSEQ9Y251 543 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 TELO2Q9Y4R8 837 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.71□□□□□ -1.34
HMGCL-206ENST00000496907 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 MYH15Q9Y2K3 1946 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 BRWD1Q9NSI6 2320 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 ZFYVE26Q68DK2 2539 aa6.71□□□□□ -1.34
HMGCL-206ENST00000496907 MYH7BA7E2Y1 1941 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 MCM3APO60318 1980 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 A0A1B0GVL5 298 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 EPOPA6NHQ4 379 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 PP2D1A8MPX8 630 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 ZBTB39O15060 712 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 HOXA2O43364 376 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 DCXO43602 365 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 TRAK2O60296 914 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 KINO60870 393 aaKnown RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 GPR32O75388 356 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 ERLIN2O94905 339 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 ZIC2O95409 532 aaPredicted RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 EOMESO95936 686 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 CHRNA1P02708 482 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 STAG3L1P0CL83 205 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 SRGAP2CP0DJJ0 459 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 DARSP14868 501 aaKnown RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 PFKFB1P16118 471 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 POU3F3P20264 500 aaPredicted RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 PPP1R2P41236 205 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 RAB27AP51159 221 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 SNRPFP62306 86 aaKnown RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 FAM160A1Q05DH4 1040 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 MGAT3Q09327 533 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 STRN3Q13033 797 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 PAK2Q13177 524 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 HIC1Q14526 733 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 MCM6Q14566 821 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 SUZ12Q15022 739 aaKnown RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 ECM1Q16610 540 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 MAPK6Q16659 721 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 KYAT1Q16773 422 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 FAM187BQ17R55 369 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 PLEKHG4Q58EX7 1191 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 SPECC1Q5M775 1068 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 FBXO47Q5MNV8 452 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 PLA2G4FQ68DD2 849 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 DEFB128Q7Z7B8 93 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 GPBP1Q86WP2 473 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 LRRC71Q8N4P6 559 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 MYCT1Q8N699 235 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 RNF149Q8NC42 400 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 TRAPPC12Q8WVT3 735 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 DHX38Q92620 1227 aaKnown RBP6.7□□□□□ -1.34
HMGCL-206ENST00000496907 DDX12PQ92771 950 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 WNT2BQ93097 391 aa6.7□□□□□ -1.34
HMGCL-206ENST00000496907 TMEM143Q96AN5 459 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms