RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
SRRM1-220ENST00000496882 RABEP1Q15276 862 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 LONRF3Q496Y0 759 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 NOMO2Q5JPE7 1267 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 TMEM31Q5JXX7 168 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 CLLU1OSQ5K130 101 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 HAUS3Q68CZ6 603 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 NOTUMQ6P988 496 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 ADGRD2Q7Z7M1 963 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 ZNF598Q86UK7 904 aaKnown RBP8.71□□□□□ -1.02
SRRM1-220ENST00000496882 ADHFE1Q8IWW8 467 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 RAB34Q9BZG1 259 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 GBP3Q9H0R5 595 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 TUFT1Q9NNX1 390 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 UBN1Q9NPG3 1134 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 RNF19AQ9NV58 838 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 KANSL3Q9P2N6 904 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 WRAP73Q9P2S5 460 aaPredicted RBP8.71□□□□□ -1.02
SRRM1-220ENST00000496882 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 STK39Q9UEW8 545 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 PCDHGC3Q9UN70 934 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 PCDHB2Q9Y5E7 798 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 WDR81Q562E7 1941 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 CNTNAP2Q9UHC6 1331 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 VCANP13611 3396 aa8.71□□□□□ -1.02
SRRM1-220ENST00000496882 FNDC1Q4ZHG4 1894 aaPredicted RBP8.7□□□□□ -1.02
SRRM1-220ENST00000496882 ARHGEF35A5YM69 484 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 POTEMA6NI47 508 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 PER2O15055 1255 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 LINC01565O15544 149 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 USO1O60763 962 aaKnown RBP8.7□□□□□ -1.02
SRRM1-220ENST00000496882 ZNF623O75123 536 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 TBX10O75333 385 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 NR1I2O75469 434 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 XRCC6P12956 609 aaKnown RBP eCLIP8.7□□□□□ -1.02
SRRM1-220ENST00000496882 ITGA4P13612 1032 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 LTBRP36941 435 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 PBX3P40426 434 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 TECP42680 631 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 TRAPPC10P48553 1259 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 BCAR1P56945 870 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 ERVFC1P60507 584 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 GIT2Q14161 759 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 ZNF174Q15697 407 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 SMAD2Q15796 467 aaKnown RBP8.7□□□□□ -1.02
SRRM1-220ENST00000496882 DUSP6Q16828 381 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 TTC38Q5R3I4 469 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 LRRC55Q6ZSA7 311 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 NOSTRINQ8IVI9 506 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 ZBTB8OSQ8IWT0 167 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 SLC39A11Q8N1S5 342 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 MCPH1Q8NEM0 835 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 FBXO18Q8NFZ0 1043 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 PIGOQ8TEQ8 1089 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 TSC1Q92574 1164 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 LPPQ93052 612 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 CCDC51Q96ER9 411 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 MTMR9Q96QG7 549 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 NACC1Q96RE7 527 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 HSD17B14Q9BPX1 270 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 RSAD1Q9HA92 442 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 KIAA1671Q9BY89 1806 aa8.7□□□□□ -1.02
SRRM1-220ENST00000496882 REV3LO60673 3130 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 XIRP2A4UGR9 3374 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 LRRIQ4A6NIV6 560 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 H3BQV1 296 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 FSCN2O14926 492 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 ZBTB39O15060 712 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 ATF7P17544 494 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-220ENST00000496882 MUTP22033 750 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 RARRES1P49788 294 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 PTENP60484 403 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 ZP2Q05996 745 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 POU5F1BQ06416 359 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 DLX2Q07687 328 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-220ENST00000496882 ST3GAL1Q11201 340 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 COASYQ13057 564 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 MCTP1Q6DN14 999 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 LLGL2Q6P1M3 1020 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 SMRP1Q8NCR6 262 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 CASP10Q92851 521 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 PBXIP1Q96AQ6 731 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 MSLNLQ96KJ4 702 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 POLR3CQ9BUI4 534 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-220ENST00000496882 POLR3FQ9H1D9 316 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-220ENST00000496882 C2orf40Q9H1Z8 148 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 TMEM60Q9H2L4 133 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 EPHX3Q9H6B9 360 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 TBC1D13Q9NVG8 400 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 DBR1Q9UK59 544 aaKnown RBP8.69□□□□□ -1.02
SRRM1-220ENST00000496882 BARX2Q9UMQ3 279 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-220ENST00000496882 HCN4Q9Y3Q4 1203 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 PCDHGC5Q9Y5F6 944 aa8.69□□□□□ -1.02
SRRM1-220ENST00000496882 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-220ENST00000496882 PI4K2BG5E9Z4 385 aa8.68□□□□□ -1.02
SRRM1-220ENST00000496882 DCXO43602 365 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms