RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TMEM87AQ8NBN3 555 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 PAGE5Q96GU1 130 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 EIF2AQ9BY44 585 aaKnown RBP13.7□□□□□ -0.22
TRA2A-209ENST00000494255 BLZF1Q9H2G9 400 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 PDZD7Q9H5P4 517 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 TNFSF13BQ9Y275 285 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 FRMD3A2A2Y4 597 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 LCHNA4D1U4 455 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 TBKBP1A7MCY6 615 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 MYL1P05976 194 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 FGFR1P11362 822 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ITGA4P13612 1032 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ALCAMQ13740 583 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 DCAF4L1Q3SXM0 396 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 PAN2Q504Q3 1202 aaKnown RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 STXBP4Q6ZWJ1 553 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 UNC13DQ70J99 1090 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 MRPL10Q7Z7H8 261 aaKnown RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 KCNN1Q92952 543 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ZNF689Q96CS4 500 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ACO2Q99798 780 aaKnown RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 TARS2Q9BW92 718 aaKnown RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 PVALEFA0A1B0GWK0 134 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 GCNT3O95395 438 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 EDN1P05305 212 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 GATMP50440 423 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 CUL4BQ13620 913 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ZNF720Q7Z2F6 126 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 FMR1NBQ8N0W7 255 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 LPPQ93052 612 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 CCDC47Q96A33 483 aaKnown RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 HVCN1Q96D96 273 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 FIZ1Q96SL8 496 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 TCHPQ9BT92 498 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 ZNF576Q9H609 170 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 RC3H2Q9HBD1 1191 aaKnown RBP13.69□□□□□ -0.22
TRA2A-209ENST00000494255 UBN1Q9NPG3 1134 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 IPPQ9Y573 584 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 PCDHB13Q9Y5F0 798 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
TRA2A-209ENST00000494255 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
TRA2A-209ENST00000494255 LINC01553A4QN01 128 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 HNRNPDLO14979 420 aaKnown RBP13.68□□□□□ -0.22
TRA2A-209ENST00000494255 CASP1P29466 404 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 MATR3P43243 847 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRA2A-209ENST00000494255 LIG4P49917 911 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 UBE2HP62256 183 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 GTF2BQ00403 316 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 TAP1Q03518 808 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 ZNF568Q3ZCX4 644 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
TRA2A-209ENST00000494255 EEF1DP3Q658K8 133 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 CLEC17AQ6ZS10 378 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 SMG8Q8ND04 991 aaKnown RBP13.68□□□□□ -0.22
TRA2A-209ENST00000494255 HELQQ8TDG4 1101 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 TGS1Q96RS0 853 aaKnown RBP13.68□□□□□ -0.22
TRA2A-209ENST00000494255 APOL6Q9BWW8 343 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 RSAD1Q9HA92 442 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 EXOC1Q9NV70 894 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 EXOC7Q9UPT5 735 aa13.68□□□□□ -0.22
TRA2A-209ENST00000494255 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
TRA2A-209ENST00000494255 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
TRA2A-209ENST00000494255 TOM1L1O75674 476 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 CLLU1OSQ5K130 101 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 FAM26FQ5R3K3 315 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 SPOUT1Q5T280 376 aaKnown RBP13.67□□□□□ -0.22
TRA2A-209ENST00000494255 MPZL3Q6UWV2 235 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 MAP4K3Q8IVH8 894 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 CASD1Q96PB1 797 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 ACCSQ96QU6 501 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 MRPL9Q9BYD2 267 aaKnown RBP13.67□□□□□ -0.22
TRA2A-209ENST00000494255 NXF3Q9H4D5 531 aaKnown RBP13.67□□□□□ -0.22
TRA2A-209ENST00000494255 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
TRA2A-209ENST00000494255 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 RWDD3Q9Y3V2 267 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 HES2Q9Y543 173 aa13.67□□□□□ -0.22
TRA2A-209ENST00000494255 KINO60870 393 aaKnown RBP13.66□□□□□ -0.22
TRA2A-209ENST00000494255 PIGRP01833 764 aa13.66□□□□□ -0.22
TRA2A-209ENST00000494255 MCF2P10911 925 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms