RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 MFSD5Q6N075 450 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 FAM13CQ8NE31 585 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 LRRC8CQ8TDW0 803 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 ZNF296Q8WUU4 475 aaPredicted RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 OLFM3Q96PB7 478 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 HAPLN3Q96S86 360 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 CARD9Q9H257 536 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 ZNF408Q9H9D4 720 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 PREBQ9HCU5 417 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 KBTBD4Q9NVX7 518 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 AMACRQ9UHK6 382 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 TLDC2A0PJX2 215 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 POTEFA5A3E0 1075 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 EPHB6O15197 1021 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 FAM200BP0CF97 657 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 TNNI2P48788 182 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 DRG2P55039 364 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 GTF2IP78347 998 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 EARS2Q5JPH6 523 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 AKNAD1Q5T1N1 836 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 RASIP1Q5U651 963 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 POTEEQ6S8J3 1075 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 PPFIBP2Q8ND30 876 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 WDR66Q8TBY9 1149 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CENPKQ9BS16 269 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 DDX23Q9BUQ8 820 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 EPB41L4BQ9H329 900 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 NMRK1Q9NWW6 199 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 GGT7Q9UJ14 662 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 TTC7AQ9ULT0 858 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 PACSIN2Q9UNF0 486 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 TTI1O43156 1089 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 AFPP02771 609 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 HIBADHP31937 336 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ZAP70P43403 619 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 LSAMPQ13449 338 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CCDC6Q16204 474 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 Q4G0T1 1027 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CEP128Q6ZU80 1094 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 NKX2-3Q8TAU0 364 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CKAP2Q8WWK9 683 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 GATA6Q92908 595 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 MS4A4AQ96JQ5 239 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 AP1M1Q9BXS5 423 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 DPH5Q9H2P9 285 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 USP40Q9NVE5 1235 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ZNF70Q9UC06 446 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 TRIM33Q9UPN9 1127 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 WDR37Q9Y2I8 494 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 DIS3Q9Y2L1 958 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ATRNL1Q5VV63 1379 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ATAD5Q96QE3 1844 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 SIGLEC16A6NMB1 481 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 MAFGO15525 162 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ATP9AO75110 1047 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CAPN15O75808 1086 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 PDE4DQ08499 809 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 SF3A3Q12874 501 aaKnown RBP eCLIP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 DHX34Q14147 1143 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 MAP7Q14244 749 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CNNM4Q6P4Q7 775 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 FOXR2Q6PJQ5 311 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 MFSD6Q6ZSS7 791 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 VSIG1Q86XK7 387 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 KIAA0825Q8IV33 1275 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 SYCE1Q8N0S2 351 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 RUNDC3BQ96NL0 473 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 SPATA16Q9BXB7 569 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 PPP1R12CQ9BZL4 782 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 CCSER1Q9C0I3 900 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 ZDHHC18Q9NUE0 388 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 MTRF1LQ9UGC7 380 aaKnown RBP7.58□□□□□ -1.2
EPHA3-203ENST00000494014 RASAL2Q9UJF2 1139 aa7.58□□□□□ -1.2
EPHA3-203ENST00000494014 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-203ENST00000494014 TRAFD1O14545 582 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-203ENST00000494014 RASGRF2O14827 1237 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 TRPA1O75762 1119 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 PDE8BO95263 885 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 GTF2A2P52657 109 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 IFI35P80217 286 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-203ENST00000494014 POU5F1Q01860 360 aaKnown RBP7.57□□□□□ -1.2
EPHA3-203ENST00000494014 MCL1Q07820 350 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 PKN1Q16512 942 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 CNPY1Q3B7I2 92 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 NAALADL2Q58DX5 795 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 RBM26Q5T8P6 1007 aaKnown RBP7.57□□□□□ -1.2
EPHA3-203ENST00000494014 DUPD1Q68J44 220 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 CENPPQ6IPU0 288 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 METTL13Q8N6R0 699 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 UCMAQ8WVF2 138 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 FAM163AQ96GL9 167 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-203ENST00000494014 SLX1AQ9BQ83 275 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 LZTS2Q9BRK4 669 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 ERP44Q9BS26 406 aa7.57□□□□□ -1.2
EPHA3-203ENST00000494014 NLRC4Q9NPP4 1024 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms