RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 GDAQ9Y2T3 454 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 RWDD3Q9Y3V2 267 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 PCDHB7Q9Y5E2 793 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 MTCH2Q9Y6C9 303 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 SLC16A4O15374 487 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 ZSCAN20P17040 1043 aaPredicted RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 NMT1P30419 496 aaKnown RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 NAMPTP43490 491 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 NPTX2P47972 431 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 TYRO3Q06418 890 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 STK4Q13043 487 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 GPM6BQ13491 265 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 CAPSQ13938 189 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 STX1AQ16623 288 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 PTPROQ16827 1216 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 PAN2Q504Q3 1202 aaKnown RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 SPOUT1Q5T280 376 aaKnown RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 ZNF658Q5TYW1 1059 aaPredicted RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 STXBP4Q6ZWJ1 553 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 ZBTB8OSQ8IWT0 167 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 TMEM192Q8IY95 271 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 SMYD4Q8IYR2 804 aaPredicted RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 RNF149Q8NC42 400 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 SP7Q8TDD2 431 aaPredicted RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 TMEM40Q8WWA1 233 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 SPIRE2Q8WWL2 714 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 ADAM2Q99965 735 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 KIFC3Q9BVG8 833 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 GTPBP4Q9BZE4 634 aaKnown RBP14.75□□□□□ -0.05
MSH6-208ENST00000493177 ERVK-5Q9HDB9 667 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 PRDM6Q9NQX0 595 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 C1orf112Q9NSG2 853 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 ANO10Q9NW15 660 aa14.75□□□□□ -0.05
MSH6-208ENST00000493177 MYH11P35749 1972 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 COL4A6Q14031 1691 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
MSH6-208ENST00000493177 H0YCG3 227 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 MYBP10242 640 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 MAPTP10636 758 aaKnown RBP14.74□□□□□ -0.05
MSH6-208ENST00000493177 EHHADHQ08426 723 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 STIM1Q13586 685 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 EPC2Q52LR7 807 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 FAM228AQ86W67 206 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 LINC01599Q8WXQ3 324 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 FGFBP2Q9BYJ0 223 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 GCOM2Q9BZD3 368 aaPredicted RBP14.74□□□□□ -0.05
MSH6-208ENST00000493177 OLFML3Q9NRN5 406 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 MAPK8IP1Q9UQF2 711 aa14.74□□□□□ -0.05
MSH6-208ENST00000493177 A0A087WZ62 844 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 GPR32O75388 356 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 PRPF6O94906 941 aaKnown RBP14.73□□□□□ -0.05
MSH6-208ENST00000493177 KIF20AO95235 890 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 PHKA2P46019 1235 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 GPC3P51654 580 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 NCKAP1LP55160 1127 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 CDC42EP1Q00587 391 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 KLHL10Q6JEL2 608 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 FAM43BQ6ZT52 329 aaPredicted RBP14.73□□□□□ -0.05
MSH6-208ENST00000493177 ZNF720Q7Z2F6 126 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 HAUS6Q7Z4H7 955 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 KIAA0895Q8NCT3 520 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 GLIS3Q8NEA6 775 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 FDXACB1Q9BRP7 624 aaPredicted RBP14.73□□□□□ -0.05
MSH6-208ENST00000493177 C2orf40Q9H1Z8 148 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 TMX1Q9H3N1 280 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 PCDHB13Q9Y5F0 798 aa14.73□□□□□ -0.05
MSH6-208ENST00000493177 MGEA5O60502 916 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 DGKIO75912 1065 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 CSPG5O95196 566 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 POU3F3P20264 500 aaPredicted RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 BMP6P22004 513 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 SFPQP23246 707 aaKnown RBP eCLIP14.72□□□□□ -0.05
MSH6-208ENST00000493177 EIF4BP23588 611 aaKnown RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 CASP5P51878 434 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 ALCAMQ13740 583 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 DPCR1Q3MIW9 517 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 ZC2HC1CQ53FD0 456 aaPredicted RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 TJAP1Q5JTD0 557 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 LRSAM1Q6UWE0 723 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 SLC24A5Q71RS6 500 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 RTN4RL1Q86UN2 441 aaPredicted RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 ZNF410Q86VK4 478 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 NELFCDQ8IXH7 590 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 CMTR2Q8IYT2 770 aaKnown RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 MLKLQ8NB16 471 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 TMEM161BQ8NDZ6 487 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 ATXN2LQ8WWM7 1075 aaKnown RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 FIZ1Q96SL8 496 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 INO80BQ9C086 356 aaPredicted RBP14.72□□□□□ -0.05
MSH6-208ENST00000493177 RGS18Q9NS28 235 aa14.72□□□□□ -0.05
MSH6-208ENST00000493177 LAMA2P24043 3122 aaKnown RBP14.71□□□□□ -0.05
MSH6-208ENST00000493177 TBKBP1A7MCY6 615 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 INO80B-WBP1J3KQ70 363 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 K7ERI5 159 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 EIF3DO15371 548 aaKnown RBP eCLIP14.71□□□□□ -0.05
MSH6-208ENST00000493177 LPXNO60711 386 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms