RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 JPH2Q9BR39 696 aaPredicted RBP15.31■□□□□ 0.04
SAMM50-204ENST00000493161 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
SAMM50-204ENST00000493161 WDR6Q9NNW5 1121 aaKnown RBP15.31■□□□□ 0.04
SAMM50-204ENST00000493161 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
SAMM50-204ENST00000493161 RGL1Q9NZL6 768 aa15.31■□□□□ 0.04
SAMM50-204ENST00000493161 IGSF9Q9P2J2 1179 aa15.31■□□□□ 0.04
SAMM50-204ENST00000493161 IPPQ9Y573 584 aa15.31■□□□□ 0.04
SAMM50-204ENST00000493161 CNTNAP2Q9UHC6 1331 aa15.31■□□□□ 0.04
SAMM50-204ENST00000493161 ARL5CA6NH57 179 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 CLUHO75153 1309 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 ITGA4P13612 1032 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 MLH1P40692 756 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 FOXK2Q01167 660 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 DSC1Q08554 894 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 STK3Q13188 491 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 EMC2Q15006 297 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 FERMT3Q86UX7 667 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 SLC44A3Q8N4M1 653 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 HAS1Q92839 578 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 ZFP42Q96MM3 310 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 RTP3Q9BQQ7 232 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 GJB4Q9NTQ9 266 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 CA14Q9ULX7 337 aa15.3■□□□□ 0.04
SAMM50-204ENST00000493161 STK25O00506 426 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 TSPAN1O60635 241 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 DEXIO95424 95 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 GLUD1P00367 558 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 P4HBP07237 508 aaKnown RBP15.29■□□□□ 0.04
SAMM50-204ENST00000493161 ADH1AP07327 375 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 PSMA5P28066 241 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 RFC5P40937 340 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 GLUD2P49448 558 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 SCNN1GP51170 649 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 RUFY3Q7L099 469 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-204ENST00000493161 PALB2Q86YC2 1186 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 GLYCTKQ8IVS8 523 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 RIN2Q8WYP3 895 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-204ENST00000493161 SMG7Q92540 1137 aaKnown RBP15.29■□□□□ 0.04
SAMM50-204ENST00000493161 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 DYDC2Q96IM9 177 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 LXNQ9BS40 222 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 APOL6Q9BWW8 343 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 EPS15L1Q9UBC2 864 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 WNT16Q9UBV4 365 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 STK39Q9UEW8 545 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 FAM186AA6NE01 2351 aa15.29■□□□□ 0.04
SAMM50-204ENST00000493161 YWHABP31946 246 aaKnown RBP15.28■□□□□ 0.04
SAMM50-204ENST00000493161 ID4P47928 161 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 DSG1Q02413 1049 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 CTTNQ14247 550 aaKnown RBP15.28■□□□□ 0.04
SAMM50-204ENST00000493161 XKR9Q5GH70 373 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
SAMM50-204ENST00000493161 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 KRT25Q7Z3Z0 450 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 C4orf19Q8IY42 314 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 OXER1Q8TDS5 423 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 GPR152Q8TDT2 470 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 FAM20AQ96MK3 541 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 GPR62Q9BZJ7 368 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 CACNG4Q9UBN1 327 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 R4GN57 208 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 WDR87Q6ZQQ6 2873 aa15.28■□□□□ 0.04
SAMM50-204ENST00000493161 CPLX1O14810 134 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 TGM5O43548 720 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 ERLIN2O94905 339 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 DCNP07585 359 aaKnown RBP15.27■□□□□ 0.04
SAMM50-204ENST00000493161 RPL17P18621 184 aaKnown RBP15.27■□□□□ 0.04
SAMM50-204ENST00000493161 PTENP60484 403 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 EPHA7Q15375 998 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 AMHR2Q16671 573 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 SPECC1Q5M775 1068 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.04
SAMM50-204ENST00000493161 GSTCDQ8NEC7 633 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 ASAP3Q8TDY4 903 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 PHF20Q9BVI0 1012 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 NT5C3AQ9H0P0 336 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 NXF3Q9H4D5 531 aaKnown RBP15.27■□□□□ 0.04
SAMM50-204ENST00000493161 TBC1D17Q9HA65 648 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.04
SAMM50-204ENST00000493161 GVINP1Q7Z2Y8 2422 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 COL4A3Q01955 1670 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 B4GALT5O43286 388 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 GAS2O43903 313 aaKnown RBP15.26■□□□□ 0.03
SAMM50-204ENST00000493161 CCNT1O60563 726 aaKnown RBP15.26■□□□□ 0.03
SAMM50-204ENST00000493161 PAPLNO95428 1278 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 SRFP11831 508 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 LAMP2P13473 410 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 AKAP5P24588 427 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 PPP4R3AQ6IN85 833 aa15.26■□□□□ 0.03
SAMM50-204ENST00000493161 GALNT17Q6IS24 598 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms