RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 MRPL4Q9BYD3 311 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 INO80BQ9C086 356 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 FAM49AQ9H0Q0 323 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 NDST4Q9H3R1 872 aa15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 IFT122Q9HBG6 1241 aa15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 IMPACTQ9P2X3 320 aa15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 GTF2IRD1Q9UHL9 959 aa15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.05
PDZRN3-210ENST00000492909 A0A087WZ62 844 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 GARTP22102 1010 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 GPC3P51654 580 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 NLRP11P59045 1033 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 ZNF200P98182 395 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 PPP2R3AQ06190 1150 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 GLIPR1L2Q4G1C9 344 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 FKBP15Q5T1M5 1219 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 SPECC1LQ69YQ0 1117 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 SLFN12LQ6IEE8 588 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 ZPBP2Q6X784 338 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 PPP1R16BQ96T49 567 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 FDXACB1Q9BRP7 624 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 TMEM106CQ9BVX2 250 aa15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 KIAA0100Q14667 2235 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-210ENST00000492909 MOXD2PA6NHM9 499 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 PBX1P40424 430 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 ACLYP53396 1101 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 MBTD1Q05BQ5 628 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 PTPN21Q16825 1174 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 TAF2Q6P1X5 1199 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 RUFY4Q6ZNE9 571 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 ARRDC4Q8NCT1 418 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 U2AF1L4Q8WU68 220 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 TSEN34Q9BSV6 310 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 FZD8Q9H461 694 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 PRMT7Q9NVM4 692 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 STYXL1Q9Y6J8 313 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 ACKR2O00590 384 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 KIAA0391O15091 583 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 MAPK13O15264 365 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 EDN1P05305 212 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 FAM47CQ5HY64 1035 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 SESTD1Q86VW0 696 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 RDH13Q8NBN7 331 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 VTI1AQ96AJ9 217 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 BORCS6Q96GS4 357 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 MINDY3Q9H8M7 445 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 USP20Q9Y2K6 914 aa15.36■□□□□ 0.05
PDZRN3-210ENST00000492909 ITIH6Q6UXX5 1313 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 A0A1W2PQC6 194 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 TOM1L1O75674 476 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 SGPL1O95470 568 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 MATR3P43243 847 aaKnown RBP eCLIP15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 PRPF4BQ13523 1007 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 SNRNP35Q16560 246 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 FAM187BQ17R55 369 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 KIZQ2M2Z5 673 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 DCAF17Q5H9S7 520 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 TCERG1LQ5VWI1 586 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 INTS8Q75QN2 995 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 SRGAP1Q7Z6B7 1085 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 GPD1LQ8N335 351 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 NME8Q8N427 588 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 GLT1D1Q96MS3 346 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 ACO2Q99798 780 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 ANKFY1Q9P2R3 1169 aa15.35■□□□□ 0.05
PDZRN3-210ENST00000492909 GOLGA8IPA6NC78 632 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GOLGA8JA6NMD2 632 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 CLDN3O15551 220 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 CAPN15O75808 1086 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 IQCF3P0C7M6 154 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 KRT13P13646 458 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 TMEM62Q0P6H9 643 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 KCNH2Q12809 1159 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 ITGA7Q13683 1181 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GDF6Q6KF10 455 aaPredicted RBP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 ZSWIM2Q8NEG5 633 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 SLC35C1Q96A29 364 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 SAAL1Q96ER3 474 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 FBXL18Q96ME1 805 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 ERGIC2Q96RQ1 377 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GCOM2Q9BZD3 368 aaPredicted RBP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 AGO2Q9UKV8 859 aaKnown RBP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GRIN2DO15399 1336 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 A0A0B4J269 797 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 TTLL13PA6NNM8 815 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GPR32O75388 356 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 CSDE1O75534 798 aaKnown RBP15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GJA8P48165 433 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 GSDMDP57764 484 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 BFSP1Q12934 665 aa15.34■□□□□ 0.05
PDZRN3-210ENST00000492909 TMEM132AQ24JP5 1023 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms