RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 FAM237AA0A1B0GTK4 181 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 EDN1P05305 212 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 NMT1P30419 496 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 ASIC1P78348 528 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 SPOUT1Q5T280 376 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 GLB1LQ6UWU2 654 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 TAS1R3Q7RTX0 852 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 SMG8Q8ND04 991 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 BICD1Q96G01 975 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 CASD1Q96PB1 797 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 ACO2Q99798 780 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 C7orf25Q9BPX7 421 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 TCHPQ9BT92 498 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 TARS2Q9BW92 718 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 APOL6Q9BWW8 343 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 TRIM9Q9C026 710 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 BLZF1Q9H2G9 400 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 MRPL44Q9H9J2 332 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 RC3H2Q9HBD1 1191 aaKnown RBP15.35■□□□□ 0.05
CCM2-217ENST00000492883 TBC1D7Q9P0N9 293 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 SEL1LQ9UBV2 794 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 HES2Q9Y543 173 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 SIP14410 1827 aa15.35■□□□□ 0.05
CCM2-217ENST00000492883 MEIS3P2A8K0S8 358 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 ACTN4O43707 911 aaKnown RBP15.34■□□□□ 0.05
CCM2-217ENST00000492883 ABCD1P33897 745 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 ERVK-21P61565 698 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 CLLU1OSQ5K130 101 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 EEF1DP3Q658K8 133 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 AGMOQ6ZNB7 445 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 ZNF720Q7Z2F6 126 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 SPRED2Q7Z698 418 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 TMEM192Q8IY95 271 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 PAGE5Q96GU1 130 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 SAMD11Q96NU1 681 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 C17orf80Q9BSJ5 609 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 PRDM12Q9H4Q4 367 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 RSAD1Q9HA92 442 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 UBN1Q9NPG3 1134 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 RNF19AQ9NV58 838 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 TBX20Q9UMR3 447 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 TNFSF13BQ9Y275 285 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 INPP5FQ9Y2H2 1132 aa15.34■□□□□ 0.05
CCM2-217ENST00000492883 MRPL42Q9Y6G3 142 aaKnown RBP15.34■□□□□ 0.05
CCM2-217ENST00000492883 ARID2Q68CP9 1835 aa15.33■□□□□ 0.05
CCM2-217ENST00000492883 FRMD3A2A2Y4 597 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 OFD1O75665 1012 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 ZNF202O95125 648 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 GCNT3O95395 438 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 CASP1P29466 404 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCM2-217ENST00000492883 GTF2BQ00403 316 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 DCAF4L1Q3SXM0 396 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 EPC2Q52LR7 807 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 ZC2HC1CQ53FD0 456 aaPredicted RBP15.33■□□□□ 0.04
CCM2-217ENST00000492883 NOMO2Q5JPE7 1267 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 ZBTB33Q86T24 672 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 GRAMD1CQ8IYS0 662 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 LRRC43Q8N309 656 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 URGCPQ8TCY9 931 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 CCDC34Q96HJ3 373 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 FIZ1Q96SL8 496 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.04
CCM2-217ENST00000492883 NXF3Q9H4D5 531 aaKnown RBP15.33■□□□□ 0.04
CCM2-217ENST00000492883 AAASQ9NRG9 546 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 TYW1Q9NV66 732 aaKnown RBP15.33■□□□□ 0.04
CCM2-217ENST00000492883 RWDD3Q9Y3V2 267 aa15.33■□□□□ 0.04
CCM2-217ENST00000492883 RFXAPO00287 272 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 TOM1L1O75674 476 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 AKAP5P24588 427 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 CTNNB1P35222 781 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 BMPR1AP36894 532 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 LIG4P49917 911 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 RNASELQ05823 741 aaKnown RBP15.32■□□□□ 0.04
CCM2-217ENST00000492883 COASYQ13057 564 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 CUL4BQ13620 913 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 ZNF568Q3ZCX4 644 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 CNNM4Q6P4Q7 775 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 ZPBP2Q6X784 338 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 KRBA2Q6ZNG9 492 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 FBXO22Q8NEZ5 403 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 RSPH1Q8WYR4 309 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 KCNN1Q92952 543 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 CLP1Q92989 425 aaKnown RBP15.32■□□□□ 0.04
CCM2-217ENST00000492883 GAD1Q99259 594 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 GAS2L1Q99501 681 aaPredicted RBP15.32■□□□□ 0.04
CCM2-217ENST00000492883 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
CCM2-217ENST00000492883 ST6GALNAC4Q9H4F1 302 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 OLFML3Q9NRN5 406 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 SNTG2Q9NY99 539 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
CCM2-217ENST00000492883 GIT1Q9Y2X7 761 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms