RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ORC4O43929 436 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 B4GALT3O60512 393 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 GPR32O75388 356 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 AKAP3O75969 853 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 KCNA2P16389 499 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 MAPK8P45983 427 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 FAM193AP78312 1265 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 IRX4P78413 519 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 PPM1LQ5SGD2 360 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 LILRA6Q6PI73 481 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 GLB1LQ6UWU2 654 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 IFNLR1Q8IU57 520 aaPredicted RBP6.15□□□□□ -1.42
SEC13-219ENST00000492602 ZNF710Q8N1W2 664 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 RSPH1Q8WYR4 309 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 ELSPBP1Q96BH3 223 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 KIF1BPQ96EK5 621 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 TTC14Q96N46 770 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 FAM193BQ96PV7 902 aaPredicted RBP6.15□□□□□ -1.42
SEC13-219ENST00000492602 SEC62Q99442 399 aaKnown RBP6.15□□□□□ -1.42
SEC13-219ENST00000492602 ARID3AQ99856 593 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 TRMT61BQ9BVS5 477 aaKnown RBP6.15□□□□□ -1.42
SEC13-219ENST00000492602 ZNF334Q9HCZ1 680 aaPredicted RBP6.15□□□□□ -1.42
SEC13-219ENST00000492602 DACT1Q9NYF0 836 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 KCNK4Q9NYG8 393 aa6.15□□□□□ -1.42
SEC13-219ENST00000492602 PRG3Q9Y2Y8 225 aaPredicted RBP6.15□□□□□ -1.42
SEC13-219ENST00000492602 DOCK6Q96HP0 2047 aa6.15□□□□□ -1.43
SEC13-219ENST00000492602 ASCC3Q8N3C0 2202 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 MEIS3P2A8K0S8 358 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 TRIM6-TRIM34B2RNG4 842 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 DCLK1O15075 740 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 MEFVO15553 781 aaPredicted RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 PPP1R11O60927 126 aaPredicted RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 XYLBO75191 536 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 OFD1O75665 1012 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 DDHD2O94830 711 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 C1RP00736 705 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 MS4A1P11836 297 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 RPL17P18621 184 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 FGFR4P22455 802 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 EIF4BP23588 611 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 GDI1P31150 447 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 GBP1P32455 592 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 STAT5BP51692 787 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 NLRP11P59045 1033 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 C1QBPQ07021 282 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 CYP4F3Q08477 520 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 PABPC1LQ4VXU2 614 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 DGKKQ5KSL6 1271 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 COLEC12Q5KU26 742 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 LIN9Q5TKA1 542 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 CEP85Q6P2H3 762 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 PLPPR4Q7Z2D5 763 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 PIP4P1Q86T03 277 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 MAP4K3Q8IVH8 894 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 PLEKHM2Q8IWE5 1019 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 METTL13Q8N6R0 699 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 PNPLA1Q8N8W4 532 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 KBTBD3Q8NAB2 608 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 ZNF668Q96K58 619 aaPredicted RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 CHMP4BQ9H444 224 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 HCFC1R1Q9NWW0 138 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 MRPS23Q9Y3D9 190 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 SPTAN1Q13813 2472 aaKnown RBP6.14□□□□□ -1.43
SEC13-219ENST00000492602 DOPEY1Q5JWR5 2465 aa6.14□□□□□ -1.43
SEC13-219ENST00000492602 ABCA12Q86UK0 2595 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 CCDC194A0A1B0GVG4 234 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 ENO4A6NNW6 628 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 B4E1Z4 1266 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 C8AP07357 584 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 ZFYP08048 801 aaPredicted RBP6.13□□□□□ -1.43
SEC13-219ENST00000492602 HNRNPA1P09651 372 aaKnown RBP eCLIP6.13□□□□□ -1.43
SEC13-219ENST00000492602 FGRP09769 529 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 ITPKBP27987 946 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 PHKA2P46019 1235 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 OR1G1P47890 313 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 SOX9P48436 509 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 KPNA1P52294 538 aaPredicted RBP6.13□□□□□ -1.43
SEC13-219ENST00000492602 DSG1Q02413 1049 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 LMAN2Q12907 356 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 SEMA3BQ13214 749 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 ASPRV1Q53RT3 343 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 WDR44Q5JSH3 913 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 PCNX4Q63HM2 1172 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 PDXDC2PQ6P474 469 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 HDDC3Q8N4P3 179 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 PNMA1Q8ND90 353 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 FAM200AQ8TCP9 573 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 URGCPQ8TCY9 931 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 CSGALNACT1Q8TDX6 532 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 SPIRE2Q8WWL2 714 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 ADAMTS14Q8WXS8 1223 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 CDHR1Q96JP9 859 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 B3GALT6Q96L58 329 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 FCRL3Q96P31 734 aaPredicted RBP6.13□□□□□ -1.43
SEC13-219ENST00000492602 ZKSCAN3Q9BRR0 538 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 TMEM175Q9BSA9 504 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 PRORYQ9H606 182 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 ZFP14Q9HCL3 533 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 TRPV5Q9NQA5 729 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms