RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GPBP1Q86WP2 473 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 DNAJC19Q96DA6 116 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
PCCB-218ENST00000490504 RGS18Q9NS28 235 aa17.23■□□□□ 0.35
PCCB-218ENST00000490504 IGKV6-21A0A0C4DH24 114 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 DENND3A2RUS2 1198 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 STAG3L1P0CL83 205 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 CTNNB1P35222 781 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 BMPR1AP36894 532 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 QARSP47897 775 aaKnown RBP17.22■□□□□ 0.35
PCCB-218ENST00000490504 GPC3P51654 580 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 PSMD2Q13200 908 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 EPHA7Q15375 998 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 ODR4Q5SWX8 454 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 PLA2G4FQ68DD2 849 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 CCDC186Q7Z3E2 898 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 CLP1Q92989 425 aaKnown RBP17.22■□□□□ 0.35
PCCB-218ENST00000490504 HSD17B14Q9BPX1 270 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.22■□□□□ 0.35
PCCB-218ENST00000490504 IMPACTQ9P2X3 320 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 MAPK8IP1Q9UQF2 711 aa17.22■□□□□ 0.35
PCCB-218ENST00000490504 C9IYK1 514 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 P4HBP07237 508 aaKnown RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 IDEP14735 1019 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 CYP4A11Q02928 519 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 STK4Q13043 487 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 DSC3Q14574 896 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 HSP90AA4PQ58FG1 418 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 SYT2Q8N9I0 419 aaPredicted RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 NEK9Q8TD19 979 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 RGL1Q9NZL6 768 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 MRPL42Q9Y6G3 142 aaKnown RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 COL4A6Q14031 1691 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 C5orf67F2Z3F1 127 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 MAFO75444 373 aaPredicted RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 EYA4O95677 639 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 CYP11B2P19099 503 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 EIF4BP23588 611 aaKnown RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 NPEPPSP55786 919 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 EHHADHQ08426 723 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
PCCB-218ENST00000490504 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 TTC28Q96AY4 2481 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 C1orf112Q9NSG2 853 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 PANK4Q9NVE7 773 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 PCDHB7Q9Y5E2 793 aa17.21■□□□□ 0.35
PCCB-218ENST00000490504 TTC3P53804 2025 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 BICDL2A1A5D9 508 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 CSDE1O75534 798 aaKnown RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 SLITRK3O94933 977 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 KRT18P05783 430 aaKnown RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 RB1P06400 928 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 DARSP14868 501 aaKnown RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 FGFR4P22455 802 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 CCNE1P24864 410 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 SPAG1Q07617 926 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 COASYQ13057 564 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 PTPROQ16827 1216 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 NLRP7Q8WX94 980 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 HLA-CQ95604 372 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 LXNQ9BS40 222 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 SLC39A2Q9NP94 309 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 RRAGDQ9NQL2 400 aaPredicted RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 CYP26B1Q9NR63 512 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 SUCLA2Q9P2R7 463 aaPredicted RBP17.2■□□□□ 0.34
PCCB-218ENST00000490504 COG5Q9UP83 839 aa17.2■□□□□ 0.34
PCCB-218ENST00000490504 COL4A4P53420 1690 aaPredicted RBP17.19■□□□□ 0.34
PCCB-218ENST00000490504 GRM6O15303 877 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 KCNQ1P51787 676 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 FAM189BP81408 668 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
PCCB-218ENST00000490504 ARSHQ5FYA8 562 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 FAM102BQ5T8I3 360 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 TMC6Q7Z403 805 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 TPH2Q8IWU9 490 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 P2RX5Q93086 422 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 KCNF1Q9H3M0 494 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 RWDD3Q9Y3V2 267 aa17.19■□□□□ 0.34
PCCB-218ENST00000490504 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 TRIM49BA6NDI0 452 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 ZBTB39O15060 712 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCCB-218ENST00000490504 BMP1P13497 986 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 DNM2P50570 870 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 GSDMDP57764 484 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 TTI2Q6NXR4 508 aa17.18■□□□□ 0.34
PCCB-218ENST00000490504 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms