RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	RWDD2A	Q9UIY3	292 aa		19.97	■□□□□ 0.79
SRM-206	ENST00000490101	MAPK8IP1	Q9UQF2	711 aa		19.97	■□□□□ 0.79
SRM-206	ENST00000490101	RRN3P2	A6NIE6	340 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	BECN2	A8MW95	431 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	ARL2	P36404	184 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	MYL5	Q02045	173 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	PAK1	Q13153	545 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	NCAPH	Q15003	741 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	KLHL10	Q6JEL2	608 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	FOXR2	Q6PJQ5	311 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	GLIS3	Q8NEA6	775 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	SPIRE2	Q8WWL2	714 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	NELFB	Q8WX92	580 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	NTPCR	Q9BSD7	190 aa	Known RBP	19.96	■□□□□ 0.79
SRM-206	ENST00000490101	FGFBP2	Q9BYJ0	223 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	MRPL44	Q9H9J2	332 aa	Known RBP	19.96	■□□□□ 0.79
SRM-206	ENST00000490101	KCNG1	Q9UIX4	513 aa		19.96	■□□□□ 0.79
SRM-206	ENST00000490101	MYH11	P35749	1972 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	EIF3D	O15371	548 aa	Known RBP eCLIP	19.95	■□□□□ 0.78
SRM-206	ENST00000490101	MAGEB2	O15479	319 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	CCNE1	P24864	410 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	MGAT3	Q09327	533 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	ALCAM	Q13740	583 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	LPIN1	Q14693	890 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	BMT2	Q1RMZ1	405 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	MARCH8	Q5T0T0	291 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	IER5	Q5VY09	327 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	CENPP	Q6IPU0	288 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	ZNF720	Q7Z2F6	126 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	FAM178B	Q8IXR5	827 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	ZNF507	Q8TCN5	953 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	SCFD1	Q8WVM8	642 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	TCP11	Q8WWU5	503 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	SAMD11	Q96NU1	681 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	STRA6	Q9BX79	667 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	FAM49A	Q9H0Q0	323 aa	Predicted RBP	19.95	■□□□□ 0.78
SRM-206	ENST00000490101	POLR3F	Q9H1D9	316 aa	Predicted RBP	19.95	■□□□□ 0.78
SRM-206	ENST00000490101	ST6GALNAC4	Q9H4F1	302 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	UBE2Z	Q9H832	354 aa	Predicted RBP	19.95	■□□□□ 0.78
SRM-206	ENST00000490101	RAPGEFL1	Q9UHV5	662 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	CTNND2	Q9UQB3	1225 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	CDY2A	Q9Y6F7	541 aa		19.95	■□□□□ 0.78
SRM-206	ENST00000490101	GOLGA6L19	H0YKK7	550 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	C22orf31	O95567	290 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	NMT1	P30419	496 aa	Known RBP	19.94	■□□□□ 0.78
SRM-206	ENST00000490101	CASP5	P51878	434 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	NCKAP1L	P55160	1127 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	GPM6B	Q13491	265 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	SPATA1	Q5VX52	437 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	STXBP4	Q6ZWJ1	553 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	RPAIN	Q86UA6	219 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	TMEM192	Q8IY95	271 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	TRAPPC12	Q8WVT3	735 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	P2RX5	Q93086	422 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	TMEM143	Q96AN5	459 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	MRPL38	Q96DV4	380 aa	Known RBP	19.94	■□□□□ 0.78
SRM-206	ENST00000490101	IFT74	Q96LB3	600 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	PCDHB13	Q9Y5F0	798 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	UBE4B	O95155	1302 aa		19.94	■□□□□ 0.78
SRM-206	ENST00000490101	NLRC5	Q86WI3	1866 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	BICDL2	A1A5D9	508 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	MBLAC1	A4D2B0	266 aa	Predicted RBP	19.93	■□□□□ 0.78
SRM-206	ENST00000490101	PPP1R37	O75864	691 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	GCNT3	O95395	438 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	MYB	P10242	640 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	KCNA5	P22460	613 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	KLRC1	P26715	233 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	NPTX2	P47972	431 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	SMTN	P53814	917 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	PEX3	P56589	373 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	DMP1	Q13316	513 aa	Predicted RBP	19.93	■□□□□ 0.78
SRM-206	ENST00000490101	PPP2R5A	Q15172	486 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	PTPRO	Q16827	1216 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	LINC01465	Q8N7H1	131 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	BSND	Q8WZ55	320 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	KCNN1	Q92952	543 aa		19.93	■□□□□ 0.78
SRM-206	ENST00000490101	SCP2	P22307	547 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	CTNNB1	P35222	781 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	STX17	P56962	302 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	MRPS6	P82932	125 aa	Known RBP	19.92	■□□□□ 0.78
SRM-206	ENST00000490101	TMEM62	Q0P6H9	643 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	FBXO47	Q5MNV8	452 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	TTI2	Q6NXR4	508 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	FIBCD1	Q8N539	461 aa		19.92	■□□□□ 0.78
SRM-206	ENST00000490101	COL4A6	Q14031	1691 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101		H3BNC9	293 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	PRPF6	O94906	941 aa	Known RBP	19.91	■□□□□ 0.78
SRM-206	ENST00000490101	GLRA2	P23416	452 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	CD52	P31358	61 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	ABCD1	P33897	745 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	HOXD13	P35453	343 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	NAMPT	P43490	491 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	DNM2	P50570	870 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	PMS1	P54277	932 aa	Known RBP	19.91	■□□□□ 0.78
SRM-206	ENST00000490101	TPM4	P67936	248 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	GTF2B	Q00403	316 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	LRRC63	Q05C16	580 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	MXD4	Q14582	209 aa	Predicted RBP	19.91	■□□□□ 0.78
SRM-206	ENST00000490101	ZCWPW2	Q504Y3	356 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	L1TD1	Q5T7N2	865 aa	Known RBP	19.91	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms