RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ZHX3Q9H4I2 956 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 PDZD7Q9H5P4 517 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 TBX20Q9UMR3 447 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 LAMA3Q16787 3333 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 EIF3DO15371 548 aaKnown RBP eCLIP19.16■□□□□ 0.66
ERCC3-207ENST00000490062 DGKIO75912 1065 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 NMT1P30419 496 aaKnown RBP19.16■□□□□ 0.66
ERCC3-207ENST00000490062 PSMD2Q13200 908 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 KCNB1Q14721 858 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 POSTNQ15063 836 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 RAB30Q15771 203 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 DCAF4L1Q3SXM0 396 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 FAM26FQ5R3K3 315 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 GPR153Q6NV75 609 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 EPM2AIP1Q7L775 607 aaPredicted RBP19.16■□□□□ 0.66
ERCC3-207ENST00000490062 MRPL44Q9H9J2 332 aaKnown RBP19.16■□□□□ 0.66
ERCC3-207ENST00000490062 INSL6Q9Y581 213 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 PCDHB13Q9Y5F0 798 aa19.16■□□□□ 0.66
ERCC3-207ENST00000490062 TMEM265A0A087WTH1 108 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 INPPL1O15357 1258 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 HOXA2O43364 376 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 KINO60870 393 aaKnown RBP19.15■□□□□ 0.66
ERCC3-207ENST00000490062 TOM1L1O75674 476 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 RHOBTB3O94955 611 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 CASP1P29466 404 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 L1TD1Q5T7N2 865 aaKnown RBP19.15■□□□□ 0.66
ERCC3-207ENST00000490062 STXBP4Q6ZWJ1 553 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 CPB2Q96IY4 423 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 PBX4Q9BYU1 374 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 RNF19AQ9NV58 838 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 HOOK1Q9UJC3 728 aaKnown RBP19.15■□□□□ 0.66
ERCC3-207ENST00000490062 PCDHB7Q9Y5E2 793 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 PCDHB2Q9Y5E7 798 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 STYXL1Q9Y6J8 313 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 UBE4BO95155 1302 aa19.15■□□□□ 0.66
ERCC3-207ENST00000490062 GBF1Q92538 1859 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 GOLGA6L22H0YM25 854 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 PRR29P0C7W0 189 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 BMT2Q1RMZ1 405 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 APBB1IPQ7Z5R6 666 aaPredicted RBP19.14■□□□□ 0.65
ERCC3-207ENST00000490062 SMG8Q8ND04 991 aaKnown RBP19.14■□□□□ 0.65
ERCC3-207ENST00000490062 PGBD4Q96DM1 585 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 ADPGKQ9BRR6 497 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 TARS2Q9BW92 718 aaKnown RBP19.14■□□□□ 0.65
ERCC3-207ENST00000490062 EIF2AQ9BY44 585 aaKnown RBP19.14■□□□□ 0.65
ERCC3-207ENST00000490062 UBN1Q9NPG3 1134 aa19.14■□□□□ 0.65
ERCC3-207ENST00000490062 GRXCR1A8MXD5 290 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 TLL1O43897 1013 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 RPN1P04843 607 aaKnown RBP19.13■□□□□ 0.65
ERCC3-207ENST00000490062 MCF2P10911 925 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 CASP5P51878 434 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 MCL1Q07820 350 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 KMT5BQ4FZB7 885 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 ZC2HC1CQ53FD0 456 aaPredicted RBP19.13■□□□□ 0.65
ERCC3-207ENST00000490062 EEF1DP3Q658K8 133 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 MPZL3Q6UWV2 235 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 CMTR2Q8IYT2 770 aaKnown RBP19.13■□□□□ 0.65
ERCC3-207ENST00000490062 ZNF507Q8TCN5 953 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 GSDMAQ96QA5 445 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 FGFBP2Q9BYJ0 223 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 TMEM117Q9H0C3 514 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 TMEM206Q9H813 350 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 LRFN2Q9ULH4 789 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 EXOC7Q9UPT5 735 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 IPPQ9Y573 584 aa19.13■□□□□ 0.65
ERCC3-207ENST00000490062 FNDC1Q4ZHG4 1894 aaPredicted RBP19.13■□□□□ 0.65
ERCC3-207ENST00000490062 GCNT3O95395 438 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 MYBP10242 640 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 AGMOQ6ZNB7 445 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 HACE1Q8IYU2 909 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 CCDC47Q96A33 483 aaKnown RBP19.12■□□□□ 0.65
ERCC3-207ENST00000490062 ACCSQ96QU6 501 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 GTPBP4Q9BZE4 634 aaKnown RBP19.12■□□□□ 0.65
ERCC3-207ENST00000490062 CDT1Q9H211 546 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 EXOC1Q9NV70 894 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 MSRAQ9UJ68 235 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 GIT1Q9Y2X7 761 aa19.12■□□□□ 0.65
ERCC3-207ENST00000490062 LAMA2P24043 3122 aaKnown RBP19.11■□□□□ 0.65
ERCC3-207ENST00000490062 NPTXRO95502 500 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 DNAJB2P25686 324 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 SNRPFP62306 86 aaKnown RBP19.11■□□□□ 0.65
ERCC3-207ENST00000490062 POU5F1Q01860 360 aaKnown RBP19.11■□□□□ 0.65
ERCC3-207ENST00000490062 TPRNQ4KMQ1 711 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 COBLL1Q53SF7 1204 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 TMCO2Q7Z6W1 182 aaPredicted RBP19.11■□□□□ 0.65
ERCC3-207ENST00000490062 TMEM174Q8WUU8 243 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 YME1L1Q96TA2 773 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 ZBED2Q9BTP6 218 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 TRIM6Q9C030 488 aaPredicted RBP19.11■□□□□ 0.65
ERCC3-207ENST00000490062 TBC1D7Q9P0N9 293 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 USP20Q9Y2K6 914 aa19.11■□□□□ 0.65
ERCC3-207ENST00000490062 YBX2Q9Y2T7 364 aaKnown RBP19.11■□□□□ 0.65
ERCC3-207ENST00000490062 A0A0B4J269 797 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 SOX1O00570 391 aaPredicted RBP19.1■□□□□ 0.65
ERCC3-207ENST00000490062 HNRNPDLO14979 420 aaKnown RBP19.1■□□□□ 0.65
ERCC3-207ENST00000490062 CLDN3O15551 220 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 UPP2O95045 317 aa19.1■□□□□ 0.65
ERCC3-207ENST00000490062 LINC00271P0C7V0 271 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms