RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ANKRD35Q8N283 1001 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.37□□□□□ -1.55
SSR1-209ENST00000488834 TSPEARQ8WU66 669 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 SNX33Q8WV41 574 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 UHRF1Q96T88 793 aaPredicted RBP5.37□□□□□ -1.55
SSR1-209ENST00000488834 CD248Q9HCU0 757 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 DNM3Q9UQ16 869 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 HDAC5Q9UQL6 1122 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 RPTORQ8N122 1335 aa5.37□□□□□ -1.55
SSR1-209ENST00000488834 SHTN1A0MZ66 631 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 MFAP3LO75121 409 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 IPO13O94829 963 aaKnown RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 ADRB1P08588 477 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ZNF20P17024 532 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ADSLP30566 484 aaPredicted RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 PER3P56645 1201 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 CRHR2Q13324 411 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ELAVL1Q15717 326 aaKnown RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 ADRM1Q16186 407 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ANO4Q32M45 955 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 GJC2Q5T442 439 aaPredicted RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 ABHD15Q6UXT9 468 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 KCNK18Q7Z418 384 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ZNF808Q8N4W9 903 aaPredicted RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 PPM1NQ8N819 430 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 MB21D1Q8N884 522 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 GPR156Q8NFN8 814 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ZNF480Q8WV37 535 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 RIN2Q8WYP3 895 aaPredicted RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 IL17RAQ96F46 866 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 ZNF512Q96ME7 567 aaPredicted RBP5.36□□□□□ -1.55
SSR1-209ENST00000488834 SLC2A13Q96QE2 648 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 GREM2Q9H772 168 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 SH3BP1Q9Y3L3 701 aa5.36□□□□□ -1.55
SSR1-209ENST00000488834 KLHL33A6NCF5 533 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 TMEM127O75204 238 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 ECHS1P30084 290 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 MTNR1BP49286 362 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 GZMKP49863 264 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 ADAM8P78325 824 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 MALLQ13021 153 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 NOMO1Q15155 1222 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 PTPN21Q16825 1174 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 PDZD4Q76G19 769 aaPredicted RBP5.35□□□□□ -1.55
SSR1-209ENST00000488834 THEMISQ8N1K5 641 aaPredicted RBP5.35□□□□□ -1.55
SSR1-209ENST00000488834 C1orf162Q8NEQ5 155 aaPredicted RBP5.35□□□□□ -1.55
SSR1-209ENST00000488834 BORCS6Q96GS4 357 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 FAXDC2Q96IV6 333 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 WWC2-AS2Q96NR7 200 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 CEP89Q96ST8 783 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 RBM12Q9NTZ6 932 aaKnown RBP5.35□□□□□ -1.55
SSR1-209ENST00000488834 GPRC5DQ9NZD1 345 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 SAP30BPQ9UHR5 308 aaKnown RBP5.35□□□□□ -1.55
SSR1-209ENST00000488834 PCDHGA2Q9Y5H1 932 aa5.35□□□□□ -1.55
SSR1-209ENST00000488834 WASHC2CQ9Y4E1 1318 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 TRIM75PA6NK02 468 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 ITGA10O75578 1167 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 GASTP01350 101 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 GSPT1P15170 499 aaKnown RBP5.34□□□□□ -1.55
SSR1-209ENST00000488834 AGXTP21549 392 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 PTPN7P35236 360 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 APBA1Q02410 837 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 FAM214AQ32MH5 1076 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 ELOA2Q8IYF1 753 aaPredicted RBP5.34□□□□□ -1.55
SSR1-209ENST00000488834 SSH1Q8WYL5 1049 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 EDAQ92838 391 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 MIEF2Q96C03 454 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 FUBP3Q96I24 572 aaKnown RBP eCLIP5.34□□□□□ -1.55
SSR1-209ENST00000488834 CPPED1Q9BRF8 314 aaPredicted RBP5.34□□□□□ -1.55
SSR1-209ENST00000488834 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 JAG2Q9Y219 1238 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 GIT1Q9Y2X7 761 aa5.34□□□□□ -1.55
SSR1-209ENST00000488834 GABRDO14764 452 aa5.33□□□□□ -1.56
SSR1-209ENST00000488834 STC2O76061 302 aa5.33□□□□□ -1.56
SSR1-209ENST00000488834 HSP90B1P14625 803 aaKnown RBP5.33□□□□□ -1.56
SSR1-209ENST00000488834 SLC16A1P53985 500 aa5.33□□□□□ -1.56
SSR1-209ENST00000488834 CNGB1Q14028 1251 aaPredicted RBP5.33□□□□□ -1.56
SSR1-209ENST00000488834 BRDTQ58F21 947 aaPredicted RBP5.33□□□□□ -1.56
SSR1-209ENST00000488834 CBARPQ8N350 705 aaPredicted RBP5.33□□□□□ -1.56
SSR1-209ENST00000488834 MDM1Q8TC05 714 aa5.33□□□□□ -1.56
SSR1-209ENST00000488834 SH3RF3Q8TEJ3 882 aaPredicted RBP5.33□□□□□ -1.56
SSR1-209ENST00000488834 ATXN2LQ8WWM7 1075 aaKnown RBP5.33□□□□□ -1.56
SSR1-209ENST00000488834 ST8SIA2Q92186 375 aa5.33□□□□□ -1.56
SSR1-209ENST00000488834 TSC22D4Q9Y3Q8 395 aa5.33□□□□□ -1.56
SSR1-209ENST00000488834 HOXA3O43365 443 aaPredicted RBP5.32□□□□□ -1.56
SSR1-209ENST00000488834 ENDOD1O94919 500 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 RBP3P10745 1247 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 CRHR1P34998 444 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
SSR1-209ENST00000488834 MST1LQ2TV78 715 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 INAVAQ3KP66 663 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 NRN1LQ496H8 165 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 SPDYAQ5MJ70 313 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 EFCAB2Q5VUJ9 269 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 MAMDC4Q6UXC1 1216 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 APBB1IPQ7Z5R6 666 aaPredicted RBP5.32□□□□□ -1.56
SSR1-209ENST00000488834 FAM83AQ86UY5 434 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 PGBD4Q96DM1 585 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms