RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 SUFUQ9UMX1 484 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 LGALS16A8MUM7 142 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 PTPRAP18433 802 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 RPA1P27694 616 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 GABPAQ06546 454 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 SLMAPQ14BN4 828 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 HSP90AA5PQ58FG0 334 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 DNAJC24Q6P3W2 148 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 CCHCR1Q8TD31 782 aa12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
LDLRAP1-207ENST00000488127 YDJCA8MPS7 323 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 MYBP10242 640 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 CYP2C9P11712 490 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 SSTR3P32745 418 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 CIITAP33076 1130 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 GPC3P51654 580 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 KIF11P52732 1056 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 COL9A3Q14050 684 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 EMC2Q15006 297 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 FAM167BQ9BTA0 163 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ASCC2Q9H1I8 757 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 EMSYQ7Z589 1322 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 CYTH3O43739 400 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 UPP2O95045 317 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 TOB1P50616 345 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 CDO1Q16878 200 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 SCN4BQ8IWT1 228 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 GPRC5CQ9NQ84 441 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 KLC4Q9NSK0 619 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 PRDM4Q9UKN5 801 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 PLAAQ9Y263 795 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 POC1B-GALNT4F8VUJ3 575 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 VWA5AO00534 786 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ELF1P32519 619 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 SERPINB6P35237 376 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 FCGRTP55899 365 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 CNTN2Q02246 1040 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ITKQ08881 620 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 USP50Q70EL3 339 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 SIX6OS1Q8N1H7 587 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 GTF3C2Q8WUA4 911 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 Q9H521 79 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZNF148Q9UQR1 794 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 TRPA1O75762 1119 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 DSG3P32926 999 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 GCLCP48506 637 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 IRX2Q9BZI1 471 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 PTPN22Q9Y2R2 807 aa12.47□□□□□ -0.41
LDLRAP1-207ENST00000488127 KNDC1Q76NI1 1749 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 H0Y3Z8 333 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 MAFGO15525 162 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 HUS1O60921 280 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 GMNNO75496 209 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZNF18P17022 549 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 DYNLT1P63172 113 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 CCZ1BP86790 482 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 CCZ1P86791 482 aaPredicted RBP12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 GEN1Q17RS7 908 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 PALM2Q8IXS6 379 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 SLITRK6Q9H5Y7 841 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 TXLNGQ9NUQ3 528 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 SHPRHQ149N8 1683 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 A6NJR5 290 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 LRRC53A6NM62 1247 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 KBTBD13C9JR72 458 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 MMP14P50281 582 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZNF449Q6P9G9 518 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 CALN1Q9BXU9 219 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 NGRNQ9NPE2 291 aaKnown RBP12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 BCAP29Q9UHQ4 241 aa12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
LDLRAP1-207ENST00000488127 CXCL11O14625 94 aa12.46□□□□□ -0.42
LDLRAP1-207ENST00000488127 FKBP1AP62942 108 aaKnown RBP12.46□□□□□ -0.42
LDLRAP1-207ENST00000488127 CAPRIN2Q6IMN6 1127 aaKnown RBP12.46□□□□□ -0.42
LDLRAP1-207ENST00000488127 HVCN1Q96D96 273 aa12.46□□□□□ -0.42
LDLRAP1-207ENST00000488127 SUDS3Q9H7L9 328 aaPredicted RBP12.46□□□□□ -0.42
LDLRAP1-207ENST00000488127 SERPING1P05155 500 aa12.46□□□□□ -0.42
LDLRAP1-207ENST00000488127 RCN2Q14257 317 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms