RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SYT12Q8IV01 421 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 SYNE4Q8N205 404 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 LILRA3Q8N6C8 439 aaPredicted RBP6.21□□□□□ -1.42
SMC4-219ENST00000487747 UBXN4Q92575 508 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 CRAMP1Q96RY5 1269 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 NDC1Q9BTX1 674 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 TEX101Q9BY14 249 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 KCNH6Q9H252 994 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 EIF2B4Q9UI10 523 aaKnown RBP6.21□□□□□ -1.42
SMC4-219ENST00000487747 PRSS50Q9UI38 385 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 NUMBLQ9Y6R0 609 aa6.21□□□□□ -1.42
SMC4-219ENST00000487747 CENPVL1A0A0U1RR11 272 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 TRIM24O15164 1050 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 LSP1P33241 339 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 GZMKP49863 264 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 SCNN1BP51168 640 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 DUSP2Q05923 314 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 DALRD3Q5D0E6 543 aaKnown RBP6.2□□□□□ -1.42
SMC4-219ENST00000487747 BROXQ5VW32 411 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 ANKS6Q68DC2 871 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 KCNV1Q6PIU1 500 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 APPBP2Q92624 585 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 PDCD2LQ9BRP1 358 aa6.2□□□□□ -1.42
SMC4-219ENST00000487747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.2□□□□□ -1.424e-34■■■■■ 131.8
SMC4-219ENST00000487747 MRPL42Q9Y6G3 142 aaKnown RBP6.2□□□□□ -1.42
SMC4-219ENST00000487747 POLR2AP24928 1970 aaKnown RBP6.2□□□□□ -1.42
SMC4-219ENST00000487747 FKBP9O95302 570 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 ADRA1BP35368 520 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 LSSP48449 732 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 IL2P60568 153 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 TIGD2Q4W5G0 525 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 PLEKHG4Q58EX7 1191 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 METTL24Q5JXM2 366 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 LY6G5CQ5SRR4 150 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 CCDC62Q6P9F0 684 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 LMBR1LQ6UX01 489 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 BTNL9Q6UXG8 535 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 ABHD15Q6UXT9 468 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 FKBP9P1Q75LS8 142 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 GPRIN1Q7Z2K8 1008 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 GLB1L3Q8NCI6 653 aaPredicted RBP6.19□□□□□ -1.42
SMC4-219ENST00000487747 EMC7Q9NPA0 242 aa6.19□□□□□ -1.42
SMC4-219ENST00000487747 TMEM127O75204 238 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 NCR1O76036 304 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 RECQL4O94761 1208 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 XPAP23025 273 aaPredicted RBP6.18□□□□□ -1.42
SMC4-219ENST00000487747 GPR15P49685 360 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 PTPAQ15257 358 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 PITRM1Q5JRX3 1037 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 DOK3Q7L591 496 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 JAZF1Q86VZ6 243 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 BEND2Q8NDZ0 799 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 FAM193BQ96PV7 902 aaPredicted RBP6.18□□□□□ -1.42
SMC4-219ENST00000487747 TRPM5Q9NZQ8 1165 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 ANKFY1Q9P2R3 1169 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 EDARQ9UNE0 448 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 CHST2Q9Y4C5 530 aa6.18□□□□□ -1.42
SMC4-219ENST00000487747 KDM1AO60341 852 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 LPLP06858 475 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 GYPEP15421 78 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 CANXP27824 592 aaKnown RBP6.17□□□□□ -1.42
SMC4-219ENST00000487747 WNT3AP56704 352 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 SART3Q15020 963 aaKnown RBP6.17□□□□□ -1.42
SMC4-219ENST00000487747 PDCD1Q15116 288 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 CT83Q5H943 113 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 FRMD7Q6ZUT3 714 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 PPM1KQ8N3J5 372 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 MYEOVQ96EZ4 313 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 SPON1Q9HCB6 807 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 PACSIN3Q9UKS6 424 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 HDAC5Q9UQL6 1122 aa6.17□□□□□ -1.42
SMC4-219ENST00000487747 A0A087X0B3 334 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 GSG1L2A8MUP6 293 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 ZNF185O15231 689 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 NRP2O60462 931 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 PRAMEF4O60810 478 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 CDC45O75419 566 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 LTA4HP09960 611 aaKnown RBP6.16□□□□□ -1.42
SMC4-219ENST00000487747 LAG3P18627 525 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 RNASE9P60153 205 aaKnown RBP6.16□□□□□ -1.42
SMC4-219ENST00000487747 APBA1Q02410 837 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 NHLH2Q02577 135 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 DDB1Q16531 1140 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 CCDC178Q5BJE1 867 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 OR2W6PQ8NHA6 318 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 LEO1Q8WVC0 666 aaPredicted RBP6.16□□□□□ -1.42
SMC4-219ENST00000487747 SLC46A2Q9BY10 475 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 AKIP1Q9NQ31 210 aa6.16□□□□□ -1.42
SMC4-219ENST00000487747 PPFIA2O75334 1257 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 ITGA10O75578 1167 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 LMNAP02545 664 aaKnown RBP6.15□□□□□ -1.42
SMC4-219ENST00000487747 ZEB1P37275 1124 aaPredicted RBP6.15□□□□□ -1.42
SMC4-219ENST00000487747 NRG3P56975 720 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 OCRLQ01968 901 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 GDF7Q7Z4P5 450 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 GLB1L2Q8IW92 636 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 AHI1Q8N157 1196 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 RNF169Q8NCN4 708 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 OR14C36Q8NHC7 312 aa6.15□□□□□ -1.42
SMC4-219ENST00000487747 MDM1Q8TC05 714 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms