RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 HOXA11P31270 313 aaPredicted RBP11.23□□□□□ -0.61
LBR-207ENST00000487054 CDC42EP1Q00587 391 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 LAMTOR4Q0VGL1 99 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 NBR1Q14596 966 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 SLC39A14Q15043 492 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 XKR9Q5GH70 373 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 UBXN11Q5T124 520 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 TPH2Q8IWU9 490 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 GBP3Q9H0R5 595 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 NRDE2Q9H7Z3 1164 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 CHST12Q9NRB3 414 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 AGPAT5Q9NUQ2 364 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 DACT1Q9NYF0 836 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 SPG21Q9NZD8 308 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 LZTS1Q9Y250 596 aa11.23□□□□□ -0.61
LBR-207ENST00000487054 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 OFD1O75665 1012 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 ALADP13716 330 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
LBR-207ENST00000487054 CA8P35219 290 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 DDIT3P35638 169 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 PLA2G5P39877 138 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 RFC5P40937 340 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 PTPAQ15257 358 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 HYIQ5T013 277 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 ZNF318Q5VUA4 2279 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 ANKRD54Q6NXT1 300 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 AGMOQ6ZNB7 445 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 TMC7Q7Z402 723 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 RNF149Q8NC42 400 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 KCNG4Q8TDN1 519 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 SUSD6Q92537 303 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 RNF25Q96BH1 459 aaPredicted RBP11.22□□□□□ -0.61
LBR-207ENST00000487054 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 S1PR5Q9H228 398 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 DBR1Q9UK59 544 aaKnown RBP11.22□□□□□ -0.61
LBR-207ENST00000487054 PCDHB2Q9Y5E7 798 aa11.22□□□□□ -0.61
LBR-207ENST00000487054 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
LBR-207ENST00000487054 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 PRR33A8MZF0 331 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 DDHD2O94830 711 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 WEE2P0C1S8 567 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 PPM1AP35813 382 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 SLC11A1P49279 550 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 KRT85P78386 507 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 KRT17Q04695 432 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 STK38Q15208 465 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 NOMO2Q5JPE7 1267 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 CATSPER3Q86XQ3 398 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 LINC00301Q8NCQ3 95 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 SMG8Q8ND04 991 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 CPB2Q96IY4 423 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 CDCA3Q99618 268 aaPredicted RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 MTRQ99707 1265 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 INO80BQ9C086 356 aaPredicted RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.61
LBR-207ENST00000487054 HCN4Q9Y3Q4 1203 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 HES2Q9Y543 173 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 CLIC4Q9Y696 253 aa11.21□□□□□ -0.61
LBR-207ENST00000487054 PLXNA3P51805 1871 aa11.21□□□□□ -0.62
LBR-207ENST00000487054 VWA3AA6NCI4 1184 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 SPTLC2O15270 562 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 TSPAN1O60635 241 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 ZNF623O75123 536 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 DGAT1O75907 488 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 POMCP01189 267 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 GALTP07902 379 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 SPATA31C1P0DKV0 1188 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 TXLNAP40222 546 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 CCT6AP40227 531 aaKnown RBP11.2□□□□□ -0.62
LBR-207ENST00000487054 UBA7P41226 1012 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 ALDH7A1P49419 539 aaKnown RBP11.2□□□□□ -0.62
LBR-207ENST00000487054 CAPSQ13938 189 aa11.2□□□□□ -0.62
LBR-207ENST00000487054 SMC1AQ14683 1233 aaKnown RBP11.2□□□□□ -0.62
LBR-207ENST00000487054 HERC4Q5GLZ8 1057 aaPredicted RBP11.2□□□□□ -0.62
LBR-207ENST00000487054 PDE12Q6L8Q7 609 aaKnown RBP11.2□□□□□ -0.62
LBR-207ENST00000487054 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms