RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 SMAD3P84022 425 aaKnown RBP25.96■■□□□ 1.75
ABCF3-216ENST00000485921 EHHADHQ08426 723 aa25.96■■□□□ 1.75
ABCF3-216ENST00000485921 POSTNQ15063 836 aa25.96■■□□□ 1.75
ABCF3-216ENST00000485921 STRA6Q9BX79 667 aa25.96■■□□□ 1.75
ABCF3-216ENST00000485921 EIF2AQ9BY44 585 aaKnown RBP25.96■■□□□ 1.75
ABCF3-216ENST00000485921 TMEM161AQ9NX61 479 aa25.96■■□□□ 1.75
ABCF3-216ENST00000485921 TLL1O43897 1013 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 ZNF623O75123 536 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 PPP1R37O75864 691 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 NPTXRO95502 500 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 EOMESO95936 686 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 RPN1P04843 607 aaKnown RBP25.95■■□□□ 1.74
ABCF3-216ENST00000485921 MYBP10242 640 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 CASP5P51878 434 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 KMT5BQ4FZB7 885 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 HABP4Q5JVS0 413 aaKnown RBP25.95■■□□□ 1.74
ABCF3-216ENST00000485921 FAM26FQ5R3K3 315 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 EEF1DP3Q658K8 133 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 RNF169Q8NCN4 708 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 BICD1Q96G01 975 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 RAD9AQ99638 391 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 FGFBP2Q9BYJ0 223 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 TRIM6Q9C030 488 aaPredicted RBP25.95■■□□□ 1.74
ABCF3-216ENST00000485921 HOOK1Q9UJC3 728 aaKnown RBP25.95■■□□□ 1.74
ABCF3-216ENST00000485921 TNFSF13BQ9Y275 285 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 PCDHB13Q9Y5F0 798 aa25.95■■□□□ 1.74
ABCF3-216ENST00000485921 ATF7P17544 494 aaPredicted RBP25.94■■□□□ 1.74
ABCF3-216ENST00000485921 PNOCQ13519 176 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 ALCAMQ13740 583 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 ZNF598Q86UK7 904 aaKnown RBP25.94■■□□□ 1.74
ABCF3-216ENST00000485921 HVCN1Q96D96 273 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 ADPGKQ9BRR6 497 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 PBX4Q9BYU1 374 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 EXOC1Q9NV70 894 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 PCDHA11Q9Y5I1 949 aa25.94■■□□□ 1.74
ABCF3-216ENST00000485921 PBX2P40425 430 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 HTRA4P83105 476 aaPredicted RBP25.93■■□□□ 1.74
ABCF3-216ENST00000485921 L1TD1Q5T7N2 865 aaKnown RBP25.93■■□□□ 1.74
ABCF3-216ENST00000485921 ZPBP2Q6X784 338 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 STXBP4Q6ZWJ1 553 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 MRPL10Q7Z7H8 261 aaKnown RBP25.93■■□□□ 1.74
ABCF3-216ENST00000485921 MAP4K3Q8IVH8 894 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 ELOA2Q8IYF1 753 aaPredicted RBP25.93■■□□□ 1.74
ABCF3-216ENST00000485921 SMG8Q8ND04 991 aaKnown RBP25.93■■□□□ 1.74
ABCF3-216ENST00000485921 CCDC47Q96A33 483 aaKnown RBP25.93■■□□□ 1.74
ABCF3-216ENST00000485921 YME1L1Q96TA2 773 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 PTPRHQ9HD43 1115 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 MSRAQ9UJ68 235 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 IPPQ9Y573 584 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 INSL6Q9Y581 213 aa25.93■■□□□ 1.74
ABCF3-216ENST00000485921 DGKIO75912 1065 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 PIGRP01833 764 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 MYOGP15173 224 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 LIG4P49917 911 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 RAB30Q15771 203 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 APBB1IPQ7Z5R6 666 aaPredicted RBP25.92■■□□□ 1.74
ABCF3-216ENST00000485921 GLIS3Q8NEA6 775 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 LPPQ93052 612 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 PGBD4Q96DM1 585 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 ACCSQ96QU6 501 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 TCHPQ9BT92 498 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 SLC39A2Q9NP94 309 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 YBX2Q9Y2T7 364 aaKnown RBP25.92■■□□□ 1.74
ABCF3-216ENST00000485921 LAMA3Q16787 3333 aa25.92■■□□□ 1.74
ABCF3-216ENST00000485921 LAMA2P24043 3122 aaKnown RBP25.92■■□□□ 1.74
ABCF3-216ENST00000485921 SOX1O00570 391 aaPredicted RBP25.91■■□□□ 1.74
ABCF3-216ENST00000485921 HNRNPDLO14979 420 aaKnown RBP25.91■■□□□ 1.74
ABCF3-216ENST00000485921 TOM1L1O75674 476 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 PRPF6O94906 941 aaKnown RBP25.91■■□□□ 1.74
ABCF3-216ENST00000485921 FGFR1P11362 822 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 PROZP22891 400 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 GATMP50440 423 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 KCNA1Q09470 495 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 PSMD2Q13200 908 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 DCAF4L1Q3SXM0 396 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 MPZL3Q6UWV2 235 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 ZBTB33Q86T24 672 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 ZBTB45Q96K62 511 aaPredicted RBP25.91■■□□□ 1.74
ABCF3-216ENST00000485921 RNF19AQ9NV58 838 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 EXOC7Q9UPT5 735 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 HES2Q9Y543 173 aa25.91■■□□□ 1.74
ABCF3-216ENST00000485921 ABLIM1O14639 778 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 HOXA2O43364 376 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 SMC2O95347 1197 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 ITGA4P13612 1032 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 ZNF568Q3ZCX4 644 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 EPM2AIP1Q7L775 607 aaPredicted RBP25.9■■□□□ 1.74
ABCF3-216ENST00000485921 HACE1Q8IYU2 909 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 ZNF689Q96CS4 500 aaPredicted RBP25.9■■□□□ 1.74
ABCF3-216ENST00000485921 CDT1Q9H211 546 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 NXF3Q9H4D5 531 aaKnown RBP25.9■■□□□ 1.74
ABCF3-216ENST00000485921 ANKFY1Q9P2R3 1169 aa25.9■■□□□ 1.74
ABCF3-216ENST00000485921 MEIS3P2A8K0S8 358 aa25.89■■□□□ 1.74
ABCF3-216ENST00000485921 EIF3DO15371 548 aaKnown RBP eCLIP25.89■■□□□ 1.74
ABCF3-216ENST00000485921 RHOBTB3O94955 611 aa25.89■■□□□ 1.74
ABCF3-216ENST00000485921 DNAJB2P25686 324 aa25.89■■□□□ 1.74
ABCF3-216ENST00000485921 STK4Q13043 487 aa25.89■■□□□ 1.74
ABCF3-216ENST00000485921 KCNB1Q14721 858 aa25.89■■□□□ 1.74
ABCF3-216ENST00000485921 CLLU1OSQ5K130 101 aa25.89■■□□□ 1.74
ABCF3-216ENST00000485921 SYCP3Q8IZU3 236 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms