RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 NCAPH2Q6IBW4 605 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 TMC5Q6UXY8 1006 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
HMGN1-215ENST00000485550 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-215ENST00000485550 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 HAS1Q92839 578 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 TMEM143Q96AN5 459 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 DYDC2Q96IM9 177 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 DACT1Q9NYF0 836 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
HMGN1-215ENST00000485550 USTQ9Y2C2 406 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
HMGN1-215ENST00000485550 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 GPR179Q6PRD1 2367 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 MEIS3P2A8K0S8 358 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 NARSO43776 548 aaKnown RBP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 CXCL14O95715 111 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 SRGAP2CP0DJJ0 459 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 SFPQP23246 707 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 PHKA2P46019 1235 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 POLGP54098 1239 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 CDC42EP1Q00587 391 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 CYP4A11Q02928 519 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 TDGQ13569 410 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 ANKRD1Q15327 319 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 EPHA7Q15375 998 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 ZNF410Q86VK4 478 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 DCLK2Q8N568 766 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 TMEM87AQ8NBN3 555 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 INO80BQ9C086 356 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-215ENST00000485550 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 DUSP12Q9UNI6 340 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 INPP5FQ9Y2H2 1132 aa11.82□□□□□ -0.52
HMGN1-215ENST00000485550 RALGAPA1Q6GYQ0 2036 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGN1-215ENST00000485550 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGN1-215ENST00000485550 CFHP08603 1231 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 RFX1P22670 979 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 KRT2P35908 639 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 ALDH7A1P49419 539 aaKnown RBP11.81□□□□□ -0.52
HMGN1-215ENST00000485550 NEK4P51957 841 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 EMP3P54852 163 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 BCAR1P56945 870 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 ANAPC15P60006 121 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 XKR9Q5GH70 373 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 TPH2Q8IWU9 490 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 PRPF31Q8WWY3 499 aaKnown RBP11.81□□□□□ -0.52
HMGN1-215ENST00000485550 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 WASF1Q92558 559 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 ACSF2Q96CM8 615 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-215ENST00000485550 JPH2Q9BR39 696 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-215ENST00000485550 LXNQ9BS40 222 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 GBP3Q9H0R5 595 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 ZBP1Q9H171 429 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 KCNK12Q9HB15 430 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 IFT122Q9HBG6 1241 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 FAM105AQ9NUU6 356 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 DZANK1Q9NVP4 752 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 COL4A3BPQ9Y5P4 624 aa11.81□□□□□ -0.52
HMGN1-215ENST00000485550 A0A087WWV3 80 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 KRBA1A5PL33 1030 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 TBX3O15119 743 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 JAK2O60674 1132 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 BAG4O95429 457 aaKnown RBP11.8□□□□□ -0.52
HMGN1-215ENST00000485550 YWHABP31946 246 aaKnown RBP11.8□□□□□ -0.52
HMGN1-215ENST00000485550 SPECC1Q5M775 1068 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 CCDC149Q6ZUS6 474 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 OTUD6AQ7L8S5 288 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 CABP7Q86V35 215 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 TMEM173Q86WV6 379 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-215ENST00000485550 C4orf19Q8IY42 314 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 NSUN7Q8NE18 718 aaKnown RBP11.8□□□□□ -0.52
HMGN1-215ENST00000485550 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 NAP1L4Q99733 375 aaKnown RBP11.8□□□□□ -0.52
HMGN1-215ENST00000485550 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 MINDY3Q9H8M7 445 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
HMGN1-215ENST00000485550 WNT7AO00755 349 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 OFD1O75665 1012 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 SLITRK3O94933 977 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 ATP2B1P20020 1258 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 TXKP42681 527 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
HMGN1-215ENST00000485550 SPIRE1Q08AE8 756 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 BMS1Q14692 1282 aaKnown RBP11.79□□□□□ -0.52
HMGN1-215ENST00000485550 EMC2Q15006 297 aa11.79□□□□□ -0.52
HMGN1-215ENST00000485550 RSPO4Q2I0M5 234 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms