RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RMND1Q9NWS8 449 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 A0A1B0GUA9 196 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 NPTXRO95502 500 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 STXBP4Q6ZWJ1 553 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 ZBTB33Q86T24 672 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 SPATA20Q8TB22 786 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 SCFD1Q8WVM8 642 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 ZBTB45Q96K62 511 aaPredicted RBP19.56■□□□□ 0.72
CPNE1-224ENST00000483359 TRIM6Q9C030 488 aaPredicted RBP19.56■□□□□ 0.72
CPNE1-224ENST00000483359 MAN1B1Q9UKM7 699 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 PTPRSQ13332 1948 aa19.56■□□□□ 0.72
CPNE1-224ENST00000483359 MATR3P43243 847 aaKnown RBP eCLIP19.55■□□□□ 0.72
CPNE1-224ENST00000483359 ZNF568Q3ZCX4 644 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 UBXN11Q5T124 520 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 SLC27A1Q6PCB7 646 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 SLC24A5Q71RS6 500 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 SYCP3Q8IZU3 236 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 ACCSQ96QU6 501 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 TCHPQ9BT92 498 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 MTIF3Q9H2K0 278 aaKnown RBP19.55■□□□□ 0.72
CPNE1-224ENST00000483359 FAM105AQ9NUU6 356 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 HES2Q9Y543 173 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 SLC4A7Q9Y6M7 1214 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 N4BP3O15049 544 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 EFCAB14O75071 495 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 AMHP03971 560 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 SARSP49591 514 aaKnown RBP19.55■□□□□ 0.72
CPNE1-224ENST00000483359 PSMD2Q13200 908 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 ALCAMQ13740 583 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 EPM2AIP1Q7L775 607 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-224ENST00000483359 TDHQ8IZJ6 230 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 HVCN1Q96D96 273 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 KIAA1468Q9P260 1216 aa19.55■□□□□ 0.72
CPNE1-224ENST00000483359 ZMYM2Q9UBW7 1377 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 C9IYK1 514 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 EIF3DO15371 548 aaKnown RBP eCLIP19.54■□□□□ 0.72
CPNE1-224ENST00000483359 SCP2P22307 547 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 ABCD1P33897 745 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 BMP8BP34820 402 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 HOXD13P35453 343 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 NFKBIBQ15653 356 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 PRPF38BQ5VTL8 546 aaKnown RBP19.54■□□□□ 0.72
CPNE1-224ENST00000483359 CAVIN1Q6NZI2 390 aaKnown RBP19.54■□□□□ 0.72
CPNE1-224ENST00000483359 SLC39A4Q6P5W5 647 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 KCNN1Q92952 543 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 LPPQ93052 612 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 ADPGKQ9BRR6 497 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 APOL6Q9BWW8 343 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 C1orf112Q9NSG2 853 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 TNFSF13BQ9Y275 285 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 PCDHB2Q9Y5E7 798 aa19.54■□□□□ 0.72
CPNE1-224ENST00000483359 ANKRD63C9JTQ0 380 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 ZPBP2Q6X784 338 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 NXF3Q9H4D5 531 aaKnown RBP19.53■□□□□ 0.72
CPNE1-224ENST00000483359 TMEM63CQ9P1W3 806 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 EXOC7Q9UPT5 735 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 A0A0U1RQF3 1178 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 MEIS3P2A8K0S8 358 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 TOM1L1O75674 476 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 ZNF658Q5TYW1 1059 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-224ENST00000483359 RASIP1Q5U651 963 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 FAM109BQ6ICB4 259 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-224ENST00000483359 MPZL3Q6UWV2 235 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 ECHDC2Q86YB7 292 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 CEP120Q8N960 986 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 ZNF507Q8TCN5 953 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 CDT1Q9H211 546 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 PRO3102Q9H379 93 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 TMEM206Q9H813 350 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 LRFN2Q9ULH4 789 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 COLQQ9Y215 455 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-224ENST00000483359 IPPQ9Y573 584 aa19.53■□□□□ 0.72
CPNE1-224ENST00000483359 ATP2A2P16615 1042 aaKnown RBP19.52■□□□□ 0.72
CPNE1-224ENST00000483359 PTMSP20962 102 aa19.52■□□□□ 0.72
CPNE1-224ENST00000483359 OSTNP61366 133 aa19.52■□□□□ 0.72
CPNE1-224ENST00000483359 SEZ6Q53EL9 994 aa19.52■□□□□ 0.72
CPNE1-224ENST00000483359 HAPLN2Q9GZV7 340 aa19.52■□□□□ 0.72
CPNE1-224ENST00000483359 PTPRHQ9HD43 1115 aa19.52■□□□□ 0.72
CPNE1-224ENST00000483359 UBE4BO95155 1302 aa19.52■□□□□ 0.72
CPNE1-224ENST00000483359 GRXCR1A8MXD5 290 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 ABLIM1O14639 778 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 CLDN3O15551 220 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 PIGRP01833 764 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 FGFR1P11362 822 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 ATF7P17544 494 aaPredicted RBP19.52■□□□□ 0.71
CPNE1-224ENST00000483359 PROZP22891 400 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 RAB27AP51159 221 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 NOLC1Q14978 699 aaKnown RBP eCLIP19.52■□□□□ 0.713e-8■□□□□ 8.2
CPNE1-224ENST00000483359 KLHL40Q2TBA0 621 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 CCDC183Q5T5S1 534 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 SMG8Q8ND04 991 aaKnown RBP19.52■□□□□ 0.71
CPNE1-224ENST00000483359 PCDHB7Q9Y5E2 793 aa19.52■□□□□ 0.71
CPNE1-224ENST00000483359 BMP6P22004 513 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 AKAP5P24588 427 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 GATMP50440 423 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 BMT2Q1RMZ1 405 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 THNSL1Q8IYQ7 743 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 TOP1MTQ969P6 601 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 SLC9A7Q96T83 725 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms