RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CCDC160A6NGH7 325 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 DKC1O60832 514 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CRABP2P29373 138 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 BCAP31P51572 246 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CDC16Q13042 620 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 FAM117BQ6P1L5 589 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 C2CD5Q86YS7 1000 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 IFNLR1Q8IU57 520 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 FAM20CQ8IXL6 584 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 FBXL16Q8N461 479 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 ZNF579Q8NAF0 562 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 ZFP28Q8NHY6 868 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 SKA1Q96BD8 255 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 EPSTI1Q96J88 318 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 FMO2Q99518 471 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 ZMYND12Q9H0C1 365 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 ZNHIT2Q9UHR6 403 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 NR2E3Q9Y5X4 410 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 SMIM18P0DKX4 95 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 SLC1A4P43007 532 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PIP4K2AP48426 406 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 EIF2B2P49770 351 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 DNM2P50570 870 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 SLC29A2Q14542 456 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 OSTM1Q86WC4 334 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 SFR1Q86XK3 245 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 ANKRD13BQ86YJ7 626 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 GRAMD2AQ8IUY3 354 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 METTL25Q8N6Q8 603 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 TRPC4APQ8TEL6 797 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 COX4I2Q96KJ9 171 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CELF4Q9BZC1 486 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 MRGBPQ9NV56 204 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PCDHB2Q9Y5E7 798 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PI4KAP2A4QPH2 592 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 ANKRD34BA5PLL1 514 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PLSCR1O15162 318 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 SLC26A4O43511 780 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 TFAP2AP05549 437 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 BDNFP23560 247 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CDR2Q01850 454 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 AUHQ13825 339 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 NR1D2Q14995 579 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 DENND2CQ68D51 928 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 MPRIPQ6WCQ1 1025 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 MCF2L2Q86YR7 1114 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CROCCP3Q8IVE0 287 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 PI4KAP1Q8N8J0 262 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 TTLL11Q8NHH1 800 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 STMN2Q93045 179 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 EGLN2Q96KS0 407 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 MTUS1Q9ULD2 1270 aa8.35□□□□□ -1.07
COL4A5-205ENST00000483338 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.35□□□□□ -1.07
COL4A5-205ENST00000483338 TBKBP1A7MCY6 615 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 RNF113AO15541 343 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 TRMUO75648 421 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 HNRNPH3P31942 346 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 CTAG1AP78358 180 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 WDR45BQ5MNZ6 344 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 TMTC3Q6ZXV5 915 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 FASTKD5Q7L8L6 764 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 ANKRD42Q8N9B4 389 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 ANKRD36BP1Q96IX9 119 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 EYA1Q99502 592 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 TRIM31Q9BZY9 425 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 BLZF1Q9H2G9 400 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 SRPRBQ9Y5M8 271 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 WNK3Q9BYP7 1800 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 FLT4P35916 1363 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 NOTOA8MTQ0 251 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 UBE2Q2LH0YL09 131 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 RANBP6O60518 1105 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 BBOX1O75936 387 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 APOEP02649 317 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 FUCA1P04066 466 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 PABPC1P11940 636 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 ITGA4P13612 1032 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 KPNA1P52294 538 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 PMS1P54277 932 aaKnown RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 MPP2Q14168 576 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 PPP2R5BQ15173 497 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 NADK2Q4G0N4 442 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 C1orf141Q5JVX7 400 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 TAOK1Q7L7X3 1001 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 ALDH16A1Q8IZ83 802 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 ESR2Q92731 530 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-205ENST00000483338 PARVBQ9HBI1 364 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 VTA1Q9NP79 307 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms