RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 ERBB2P04626 1255 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 ZFP36P26651 326 aaKnown RBP5.03□□□□□ -1.6
RPA3-207ENST00000483031 ZEB1P37275 1124 aaPredicted RBP5.03□□□□□ -1.6
RPA3-207ENST00000483031 CLK3P49761 638 aaKnown RBP5.03□□□□□ -1.6
RPA3-207ENST00000483031 TMEM177Q53S58 311 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 TTC38Q5R3I4 469 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 LRP10Q7Z4F1 713 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 FGD2Q7Z6J4 655 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 KCNH6Q9H252 994 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 SYNPO2Q9UMS6 1093 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 CCDC9Q9Y3X0 531 aaKnown RBP5.03□□□□□ -1.6
RPA3-207ENST00000483031 CNTLNQ9NXG0 1405 aa5.03□□□□□ -1.6
RPA3-207ENST00000483031 SPATA31A6Q5VVP1 1343 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 GOLGA3Q08378 1498 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 MTSS1O43312 755 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 HNRNPLP14866 589 aaKnown RBP eCLIP5.02□□□□□ -1.61
RPA3-207ENST00000483031 AVPR1BP47901 424 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 MECP2P51608 486 aaKnown RBP5.02□□□□□ -1.61
RPA3-207ENST00000483031 BCAR1P56945 870 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 RBL2Q08999 1139 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 PRAMEF9Q5VWM5 478 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 ZNF772Q68DY9 489 aaPredicted RBP5.02□□□□□ -1.61
RPA3-207ENST00000483031 IQSEC1Q6DN90 963 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 LCORLQ8N3X6 602 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 RPGRQ92834 1020 aaKnown RBP5.02□□□□□ -1.61
RPA3-207ENST00000483031 CPPED1Q9BRF8 314 aaPredicted RBP5.02□□□□□ -1.61
RPA3-207ENST00000483031 R3HDMLQ9H3Y0 253 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 SERHL2Q9H4I8 314 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 ZNF768Q9H5H4 540 aaKnown RBP5.02□□□□□ -1.61
RPA3-207ENST00000483031 TRIM39Q9HCM9 518 aa5.02□□□□□ -1.61
RPA3-207ENST00000483031 DVL2O14641 736 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 NRP1O14786 923 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 KRT37O76014 449 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 ATP2B1P20020 1258 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 RBM25P49756 843 aaKnown RBP5.01□□□□□ -1.61
RPA3-207ENST00000483031 KIF11P52732 1056 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 ARHGAP44Q17R89 818 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 ERCC6LQ2NKX8 1250 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 METTL24Q5JXM2 366 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 EPHA10Q5JZY3 1008 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 BRAPQ7Z569 592 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 IGSF22Q8N9C0 903 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 NELL1Q92832 810 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 DEPDC7Q96QD5 511 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 TUBGCP5Q96RT8 1024 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 DNAJC7Q99615 494 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 PDCD2LQ9BRP1 358 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 WDR11Q9BZH6 1224 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 HAPLN2Q9GZV7 340 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 EPC1Q9H2F5 836 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 ACSS2Q9NR19 701 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 SNTG2Q9NY99 539 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 ANKFY1Q9P2R3 1169 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 INSL6Q9Y581 213 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 AGLP35573 1532 aa5.01□□□□□ -1.61
RPA3-207ENST00000483031 SCAPERQ9BY12 1400 aa5□□□□□ -1.61
RPA3-207ENST00000483031 AHRRA9YTQ3 701 aa5□□□□□ -1.61
RPA3-207ENST00000483031 MAFGO15525 162 aa5□□□□□ -1.61
RPA3-207ENST00000483031 LPXNO60711 386 aa5□□□□□ -1.61
RPA3-207ENST00000483031 ITGB6P18564 788 aa5□□□□□ -1.61
RPA3-207ENST00000483031 MAN2A1Q16706 1144 aa5□□□□□ -1.61
RPA3-207ENST00000483031 FAM214AQ32MH5 1076 aa5□□□□□ -1.61
RPA3-207ENST00000483031 PAPD7Q5XG87 772 aaKnown RBP5□□□□□ -1.61
RPA3-207ENST00000483031 FBXO42Q6P3S6 717 aa5□□□□□ -1.61
RPA3-207ENST00000483031 GLB1L3Q8NCI6 653 aaPredicted RBP5□□□□□ -1.61
RPA3-207ENST00000483031 UIMC1Q96RL1 719 aa5□□□□□ -1.61
RPA3-207ENST00000483031 MRPL4Q9BYD3 311 aaKnown RBP5□□□□□ -1.61
RPA3-207ENST00000483031 TANGO6Q9C0B7 1094 aa5□□□□□ -1.61
RPA3-207ENST00000483031 PCIF1Q9H4Z3 704 aa5□□□□□ -1.61
RPA3-207ENST00000483031 POLR2AP24928 1970 aaKnown RBP5□□□□□ -1.61
RPA3-207ENST00000483031 CDK12Q9NYV4 1490 aaPredicted RBP5□□□□□ -1.61
RPA3-207ENST00000483031 CCDC163A0A0D9SF12 145 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 TMEM200CA6NKL6 621 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 RNASET2O00584 256 aaKnown RBP4.99□□□□□ -1.61
RPA3-207ENST00000483031 HOXA3O43365 443 aaPredicted RBP4.99□□□□□ -1.61
RPA3-207ENST00000483031 VPS72Q15906 364 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 BHLHA9Q7RTU4 235 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 FAM83AQ86UY5 434 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 NME9Q86XW9 330 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 ARHGEF19Q8IW93 802 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 OR52N2Q8NGI0 321 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 CAVIN3Q969G5 261 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 NDC1Q9BTX1 674 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 PRDM13Q9H4Q3 707 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 RSAD1Q9HA92 442 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 TRPM5Q9NZQ8 1165 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 ZMYM3Q14202 1370 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 REREQ9P2R6 1566 aa4.99□□□□□ -1.61
RPA3-207ENST00000483031 FAM135BQ49AJ0 1406 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 LRRC7Q96NW7 1537 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 RNF17Q9BXT8 1623 aaKnown RBP4.98□□□□□ -1.61
RPA3-207ENST00000483031 FSBPO95073 299 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 CYP17A1P05093 508 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 FAM189BP81408 668 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 CCDC62Q6P9F0 684 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 CMTR2Q8IYT2 770 aaKnown RBP4.98□□□□□ -1.61
RPA3-207ENST00000483031 COQ10AQ96MF6 247 aa4.98□□□□□ -1.61
RPA3-207ENST00000483031 DCLRE1CQ96SD1 692 aaKnown RBP4.98□□□□□ -1.61
RPA3-207ENST00000483031 HIRIP3Q9BW71 556 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms