RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 AK9Q5TCS8 1911 aa7.85□□□□□ -1.15
CLK1-212ENST00000482590 RBBP6Q7Z6E9 1792 aaKnown RBP7.84□□□□□ -1.15
CLK1-212ENST00000482590 SH3D21A4FU49 640 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 TP53P04637 393 aaPredicted RBP7.84□□□□□ -1.15
CLK1-212ENST00000482590 IMPDH2P12268 514 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 CNGA1P29973 690 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 KCNJ4P48050 445 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
CLK1-212ENST00000482590 TCEA2Q15560 299 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 ZXDCQ2QGD7 858 aaPredicted RBP7.84□□□□□ -1.15
CLK1-212ENST00000482590 TMEM95Q3KNT9 176 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 DDX42Q86XP3 938 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLK1-212ENST00000482590 RASAL3Q86YV0 1011 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 SYNPOQ8N3V7 929 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 SVIPQ8NHG7 77 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 FAM126AQ9BYI3 521 aaPredicted RBP7.84□□□□□ -1.15
CLK1-212ENST00000482590 COA1Q9GZY4 146 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 FAM86C1Q9NVL1 165 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 HDAC9Q9UKV0 1011 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 PLAAQ9Y263 795 aa7.84□□□□□ -1.15
CLK1-212ENST00000482590 ZNF804BA4D1E1 1349 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 ASGR2P07307 311 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 MCL1Q07820 350 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 LRRC41Q15345 812 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 C2orf27AQ580R0 203 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 UBXN11Q5T124 520 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 STRIP1Q5VSL9 837 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 HHIPL2Q6UWX4 724 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 DNAAF4Q8WXU2 420 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 TM9SF2Q99805 663 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.83□□□□□ -1.16
CLK1-212ENST00000482590 ANKRD2Q9GZV1 360 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 RNF186Q9NXI6 227 aa7.83□□□□□ -1.16
CLK1-212ENST00000482590 IL16Q14005 1332 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 FANCIQ9NVI1 1328 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 ANKRD18BA2A2Z9 1011 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 TBX3O15119 743 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 PDPK1O15530 556 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 TBC1D8O95759 1140 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 SCGB1D2O95969 90 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 CD3EP07766 207 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 GLI4P10075 376 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 NCAM1P13591 858 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 L1CAMP32004 1257 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 COPB2P35606 906 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 RGS19P49795 217 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 MMP14P50281 582 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 GCKRQ14397 625 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 DACT2Q5SW24 774 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 UNC5AQ6ZN44 842 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 G2E3Q7L622 706 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 CTU1Q7Z7A3 348 aaKnown RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 C14orf80Q86SX3 495 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 APOBEC3FQ8IUX4 373 aaKnown RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 MYO1HQ8N1T3 1032 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 THAP3Q8WTV1 239 aaPredicted RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 MXD3Q9BW11 206 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 PLA2G12BQ9BX93 195 aa7.82□□□□□ -1.16
CLK1-212ENST00000482590 NOL6Q9H6R4 1146 aaKnown RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 DBR1Q9UK59 544 aaKnown RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 SCAF8Q9UPN6 1271 aaKnown RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 SF3B6Q9Y3B4 125 aaKnown RBP7.82□□□□□ -1.16
CLK1-212ENST00000482590 WNT10BO00744 389 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 INSRRP14616 1297 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 CHRNDQ07001 517 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 SREBF2Q12772 1141 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 INO80DQ53TQ3 878 aaPredicted RBP7.81□□□□□ -1.16
CLK1-212ENST00000482590 TNNI3KQ59H18 835 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 C10orf62Q5T681 223 aaPredicted RBP7.81□□□□□ -1.16
CLK1-212ENST00000482590 TTLL5Q6EMB2 1281 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 RUFY4Q6ZNE9 571 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 ARMC9Q7Z3E5 817 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 B3GNT8Q7Z7M8 397 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 IFNL3Q8IZI9 196 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 PAF1Q8N7H5 531 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 LINS1Q8NG48 757 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 CHAC2Q8WUX2 184 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 ZDHHC15Q96MV8 337 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 FERD3LQ96RJ6 166 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 TMPRSS5Q9H3S3 457 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 BCAS3Q9H6U6 928 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 RXFP1Q9HBX9 757 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 CNOT11Q9UKZ1 510 aaKnown RBP7.81□□□□□ -1.16
CLK1-212ENST00000482590 DUSP10Q9Y6W6 482 aa7.81□□□□□ -1.16
CLK1-212ENST00000482590 DOCK2Q92608 1830 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 CCDC163A0A0D9SF12 145 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 UBE2Q2LH0YL09 131 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 K7ESM1 405 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 ANP32CO43423 234 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 EPB41L2O43491 1005 aaKnown RBP7.8□□□□□ -1.16
CLK1-212ENST00000482590 MYO1BO43795 1136 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 ITGA4P13612 1032 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 STAT3P40763 770 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 SOX10P56693 466 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 POU4F1Q01851 419 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 POU5F1Q01860 360 aaKnown RBP7.8□□□□□ -1.16
CLK1-212ENST00000482590 PRKG1Q13976 671 aa7.8□□□□□ -1.16
CLK1-212ENST00000482590 MORC3Q14149 939 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms