RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 LEFTY2O00292 366 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 LY86O95711 162 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 CDK4P11802 303 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 GZMKP49863 264 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 DUSP2Q05923 314 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 ZNF460Q14592 562 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 ERCC6LQ2NKX8 1250 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 BEAN1Q3B7T3 259 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 CDCA2Q69YH5 1023 aaPredicted RBP3.76□□□□□ -1.81
KDM1A-204ENST00000481879 TAS1R1Q7RTX1 841 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 GPRIN1Q7Z2K8 1008 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 GLCCI1Q86VQ1 547 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 XYLT1Q86Y38 959 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 LILRB2Q8N423 598 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 LINC00476Q8WZB0 136 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 R3HDMLQ9H3Y0 253 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 SPON1Q9HCB6 807 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 OXSMQ9NWU1 459 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 CHST2Q9Y4C5 530 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 PCDHB6Q9Y5E3 794 aa3.76□□□□□ -1.81
KDM1A-204ENST00000481879 SPATA31A6Q5VVP1 1343 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 SETD1BQ9UPS6 1966 aaKnown RBP3.75□□□□□ -1.81
KDM1A-204ENST00000481879 PIPSLA2A3N6 862 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 ELL2O00472 640 aaPredicted RBP3.75□□□□□ -1.81
KDM1A-204ENST00000481879 JMJD7P0C870 316 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 HKR1P10072 659 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 CD40P25942 277 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 SEC24CP53992 1094 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 RNASE9P60153 205 aaKnown RBP3.75□□□□□ -1.81
KDM1A-204ENST00000481879 GUCY1B3Q02153 619 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 NHLH2Q02577 135 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 CFAP100Q494V2 611 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 PRR16Q569H4 304 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 SOGA3Q5TF21 947 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 CREB3L3Q68CJ9 461 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 PLXDC1Q8IUK5 500 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 CDYL2Q8N8U2 506 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 NELL1Q92832 810 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 PRDM13Q9H4Q3 707 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 RSAD1Q9HA92 442 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 INTS7Q9NVH2 962 aaKnown RBP3.75□□□□□ -1.81
KDM1A-204ENST00000481879 IFT57Q9NWB7 429 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.75□□□□□ -1.81
KDM1A-204ENST00000481879 USP36Q9P275 1121 aaKnown RBP3.75□□□□□ -1.81
KDM1A-204ENST00000481879 USP18Q9UMW8 372 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 ZKSCAN5Q9Y2L8 839 aa3.75□□□□□ -1.81
KDM1A-204ENST00000481879 INO80B-WBP1J3KQ70 363 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 ZSCAN20P17040 1043 aaPredicted RBP3.74□□□□□ -1.81
KDM1A-204ENST00000481879 TYRP1P17643 537 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 XPAP23025 273 aaPredicted RBP3.74□□□□□ -1.81
KDM1A-204ENST00000481879 CXCR5P32302 372 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 FOXI1Q12951 378 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 LRRC32Q14392 662 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 ABHD17BQ5VST6 288 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 DRICH1Q6PGQ1 229 aaPredicted RBP3.74□□□□□ -1.81
KDM1A-204ENST00000481879 ESPNLQ6ZVH7 1005 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 HDGFL2Q7Z4V5 671 aaPredicted RBP3.74□□□□□ -1.81
KDM1A-204ENST00000481879 CPEB3Q8NE35 698 aaKnown RBP3.74□□□□□ -1.81
KDM1A-204ENST00000481879 GAB3Q8WWW8 586 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 INO80BQ9C086 356 aaPredicted RBP3.74□□□□□ -1.81
KDM1A-204ENST00000481879 ZMAT4Q9H898 229 aa3.74□□□□□ -1.81
KDM1A-204ENST00000481879 ST20-MTHFSA0A0A6YYL1 179 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 A0A1W2PR48 441 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 UNC119BA6NIH7 251 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 ZNF185O15231 689 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 NRP2O60462 931 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 SEC24DO94855 1032 aaPredicted RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 HLA-DOAP06340 250 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 RBP3P10745 1247 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 ATP2A2P16615 1042 aaKnown RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 SDSP20132 328 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 PTH2RP49190 550 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 GPR15P49685 360 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 ELLP55199 621 aaPredicted RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 BLOC1S1P78537 153 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 APBA1Q02410 837 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 DDB1Q16531 1140 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 PDCD4Q53EL6 469 aaKnown RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 SYT12Q8IV01 421 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 PASD1Q8IV76 773 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 MSL3Q8N5Y2 521 aaKnown RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 SIMC1Q8NDZ2 872 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 SREK1Q8WXA9 508 aaKnown RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 FERMT2Q96AC1 680 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 TEX101Q9BY14 249 aa3.73□□□□□ -1.81
KDM1A-204ENST00000481879 H2AFY2Q9P0M6 372 aaPredicted RBP3.73□□□□□ -1.81
KDM1A-204ENST00000481879 ESRRBO95718 433 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 PFKMP08237 780 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 CLEC2LP0C7M8 214 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 SPATA31D3P0C874 917 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 DDX6P26196 483 aaKnown RBP eCLIP3.72□□□□□ -1.81
KDM1A-204ENST00000481879 MGAT1P26572 445 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 PLA2G5P39877 138 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 NRG3P56975 720 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 TP53BP2Q13625 1128 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 UBE3CQ15386 1083 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 SF3A1Q15459 793 aaKnown RBP3.72□□□□□ -1.81
KDM1A-204ENST00000481879 CCDC178Q5BJE1 867 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 EFCAB12Q6NXP0 572 aa3.72□□□□□ -1.81
KDM1A-204ENST00000481879 LMBR1LQ6UX01 489 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms