RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 SUSD6Q92537 303 aa24.63■■□□□ 1.53
GPCPD1-206ENST00000481690 NFKBIZQ9BYH8 718 aa24.63■■□□□ 1.53
GPCPD1-206ENST00000481690 ARHGEF35A5YM69 484 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 SSBP05455 408 aaKnown RBP eCLIP24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 CTSAP10619 480 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 RPA1P27694 616 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 CBX2Q14781 532 aaPredicted RBP24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 CDR2LQ86X02 465 aaPredicted RBP24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 GAD1Q99259 594 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 TMEM175Q9BSA9 504 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 S1PR5Q9H228 398 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 RNF39Q9H2S5 420 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 FAN1Q9Y2M0 1017 aa24.62■■□□□ 1.53
GPCPD1-206ENST00000481690 LOC730098B7Z3J9 87 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 ST18O60284 1047 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 NPTXRO95502 500 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 HOXB8P17481 243 aaPredicted RBP24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 GIT2Q14161 759 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 TPRNQ4KMQ1 711 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 PADI6Q6TGC4 694 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 ZBTB8OSQ8IWT0 167 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 HACE1Q8IYU2 909 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 VN1R3Q9BXE9 311 aa24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 NXF3Q9H4D5 531 aaKnown RBP24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 PRG3Q9Y2Y8 225 aaPredicted RBP24.61■■□□□ 1.53
GPCPD1-206ENST00000481690 ARL5CA6NH57 179 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 NRP1O14786 923 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 ALDH2P05091 517 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 SP100P23497 879 aaPredicted RBP24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 CCT6AP40227 531 aaKnown RBP24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 OR1G1P47890 313 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 SCNN1GP51170 649 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 HERC4Q5GLZ8 1057 aaPredicted RBP24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 SLC27A1Q6PCB7 646 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 ZFP42Q96MM3 310 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 LRWD1Q9UFC0 647 aa24.6■■□□□ 1.53
GPCPD1-206ENST00000481690 U2AF2P26368 475 aaKnown RBP eCLIP24.59■■□□□ 1.539e-7■■■□□ 15.2
GPCPD1-206ENST00000481690 FXR2P51116 673 aaKnown RBP eCLIP24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 TMEM132AQ24JP5 1023 aa24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 CES5AQ6NT32 575 aa24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 UPF2Q9HAU5 1272 aaKnown RBP24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 PRMT7Q9NVM4 692 aaPredicted RBP24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 CDH22Q9UJ99 828 aa24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 KIF3AQ9Y496 699 aa24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 PCDHB6Q9Y5E3 794 aa24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 IRAK3Q9Y616 596 aa24.59■■□□□ 1.53
GPCPD1-206ENST00000481690 LIG1P18858 919 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 AKAP5P24588 427 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 PTPN14Q15678 1187 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 MCTP1Q6DN14 999 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 C4orf32Q8N8J7 132 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 BSNDQ8WZ55 320 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 STK39Q9UEW8 545 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 PARP2Q9UGN5 583 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 GIT1Q9Y2X7 761 aa24.58■■□□□ 1.53
GPCPD1-206ENST00000481690 EPCAMP16422 314 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 CYP11B2P19099 503 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 TOB1P50616 345 aaPredicted RBP24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 PTGDRQ13258 359 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 ECM1Q16610 540 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 RARS2Q5T160 578 aaKnown RBP24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 CDCA2Q69YH5 1023 aaPredicted RBP24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 COLGALT2Q8IYK4 626 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 DEPTORQ8TB45 409 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 SNX29Q8TEQ0 813 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 FAM122AQ96E09 287 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 RAB34Q9BZG1 259 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 C2orf40Q9H1Z8 148 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 TSHZ2Q9NRE2 1034 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 MIOSQ9NXC5 875 aa24.57■■□□□ 1.52
GPCPD1-206ENST00000481690 A0A1B0GUA9 196 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 SPDYE4A6NLX3 237 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 INPPL1O15357 1258 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 MUTP22033 750 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 ITIH3Q06033 890 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 PPP4R3CPQ6ZMV5 832 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 C12orf76Q8N812 135 aaPredicted RBP24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 PRIMPOLQ96LW4 560 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 EMILIN2Q9BXX0 1053 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 BHMT2Q9H2M3 363 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 ADAM7Q9H2U9 754 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 MRPL17Q9NRX2 175 aaKnown RBP24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 DDX19AQ9NUU7 478 aaKnown RBP24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 DZANK1Q9NVP4 752 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 MARCH5Q9NX47 278 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 KLK14Q9P0G3 267 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 KIAA1024Q9UPX6 916 aa24.56■■□□□ 1.52
GPCPD1-206ENST00000481690 C2CD2LO14523 706 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 NR1I2O75469 434 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 URODP06132 367 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 WEE2P0C1S8 567 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 DSC1Q08554 894 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 PPFIBP1Q86W92 1011 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 TMX3Q96JJ7 454 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 RPS6KC1Q96S38 1066 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 FZD8Q9H461 694 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 POLD4Q9HCU8 107 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 PLXNA3P51805 1871 aa24.55■■□□□ 1.52
GPCPD1-206ENST00000481690 N4BP3O15049 544 aa24.54■■□□□ 1.52
GPCPD1-206ENST00000481690 SOD2P04179 222 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms