RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ARRDC4Q8NCT1 418 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 UBLCP1Q8WVY7 318 aaPredicted RBP20.68■□□□□ 0.9
CCM2-214ENST00000481194 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.68■□□□□ 0.9
CCM2-214ENST00000481194 SCN7AQ01118 1682 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 SYN2Q92777 582 aaPredicted RBP20.68■□□□□ 0.9
CCM2-214ENST00000481194 ERGIC2Q96RQ1 377 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 ANO9A1A5B4 782 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 RPS6KA5O75582 802 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 CYP2C8P10632 490 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 TMEM132BQ14DG7 1078 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCM2-214ENST00000481194 SLC12A6Q9UHW9 1150 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 SSX2IPQ9Y2D8 614 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 SYNGAP1Q96PV0 1343 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 SLITRK3O94933 977 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 TAP1Q03518 808 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 PDGFDQ9GZP0 370 aaPredicted RBP20.67■□□□□ 0.9
CCM2-214ENST00000481194 SSU72P8A0A1W2PR75 194 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 PGRMC1O00264 195 aaKnown RBP20.67■□□□□ 0.9
CCM2-214ENST00000481194 PSMD10O75832 226 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 AKR1A1P14550 325 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 SRGAP1Q7Z6B7 1085 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 TNFRSF25Q93038 417 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 THSD7AQ9UPZ6 1657 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 GNA15P30679 374 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
CCM2-214ENST00000481194 GMLQ99445 158 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 TTC16Q8NEE8 873 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 NSRP1Q9H0G5 558 aaKnown RBP20.67■□□□□ 0.9
CCM2-214ENST00000481194 ADAM22Q9P0K1 906 aa20.67■□□□□ 0.9
CCM2-214ENST00000481194 MOCS3O95396 460 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 TRIM62Q9BVG3 475 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 PASKQ96RG2 1323 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 TOGARAM2Q6ZUX3 1019 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 ZNF720Q7Z2F6 126 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 LRRC71Q8N4P6 559 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 OTUD6BQ8N6M0 293 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 NPTX2P47972 431 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 FZD1Q9UP38 647 aa20.66■□□□□ 0.9
CCM2-214ENST00000481194 E2F4Q16254 413 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 CENPPQ6IPU0 288 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 TNIP3Q96KP6 325 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 NOGQ13253 232 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 CCHCR1Q8TD31 782 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 GOLGA8SH3BPF8 625 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 FAM149B1Q96BN6 582 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 SH2D3AQ9BRG2 576 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 EFCC1Q9HA90 598 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 PPFIA4O75335 1185 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 RARRES1P49788 294 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
CCM2-214ENST00000481194 PLCB1Q9NQ66 1216 aa20.65■□□□□ 0.9
CCM2-214ENST00000481194 POLR3GO15318 223 aaPredicted RBP20.64■□□□□ 0.9
CCM2-214ENST00000481194 ACVR2BQ13705 512 aa20.64■□□□□ 0.9
CCM2-214ENST00000481194 SH3RF1Q7Z6J0 888 aa20.64■□□□□ 0.9
CCM2-214ENST00000481194 TMC2Q8TDI7 906 aa20.64■□□□□ 0.9
CCM2-214ENST00000481194 DNAJC18Q9H819 358 aa20.64■□□□□ 0.9
CCM2-214ENST00000481194 INPP5FQ9Y2H2 1132 aa20.64■□□□□ 0.9
CCM2-214ENST00000481194 TAL1P17542 331 aaPredicted RBP20.64■□□□□ 0.89
CCM2-214ENST00000481194 FUCA2Q9BTY2 467 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 TRAPPC3O43617 180 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 ELF2Q15723 593 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 TAOK1Q7L7X3 1001 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 COMMD10Q9Y6G5 202 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 SNED1Q8TER0 1413 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 NCOA4Q13772 614 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 TTI2Q6NXR4 508 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 AFG1LQ8WV93 481 aa20.64■□□□□ 0.89
CCM2-214ENST00000481194 CNOT8Q9UFF9 292 aaKnown RBP20.64■□□□□ 0.89
CCM2-214ENST00000481194 OGTO15294 1046 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 PRPSAP2O60256 369 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 KRT1P04264 644 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 PNPLA4P41247 253 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 CYP27A1Q02318 531 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 CCDC144BQ3MJ40 725 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 MPZL3Q6UWV2 235 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 RUFY4Q6ZNE9 571 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 RSRC2Q7L4I2 434 aaKnown RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 ZNF507Q8TCN5 953 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 PRPF31Q8WWY3 499 aaKnown RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 RABGGTAQ92696 567 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 ITGA4P13612 1032 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 CNTN2Q02246 1040 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 CYP2W1Q8TAV3 490 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 AGPAT1Q99943 283 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 C4AP0C0L4 1744 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 GPR182O15218 404 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 ZC3H11AO75152 810 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCM2-214ENST00000481194 ARL4AP40617 200 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 ACOT2P49753 483 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 ARL13BQ3SXY8 428 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 ZNF668Q96K58 619 aaPredicted RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 A0A0G2JLL6 359 aaPredicted RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 SLC12A3P55017 1021 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 CELF3Q5SZQ8 465 aaKnown RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 PRRT2Q7Z6L0 340 aaPredicted RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 ZNF677Q86XU0 584 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 MYCP01106 439 aaPredicted RBP20.63■□□□□ 0.89
CCM2-214ENST00000481194 UCHL3P15374 230 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 LY6KQ17RY6 165 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms