RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 ALDH1A2O94788 518 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 RHCEP18577 417 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 MRE11P49959 708 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 USP14P54578 494 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 RHDQ02161 417 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 GALEQ14376 348 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 SEPT2Q15019 361 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 PCOLCEQ15113 449 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 KIAA0753Q2KHM9 967 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 PRR31Q5SQ13 230 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 KRT40Q6A162 431 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 LARP4Q71RC2 724 aaKnown RBP eCLIP6.9□□□□□ -1.3
BRAF-203ENST00000479537 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
BRAF-203ENST00000479537 ZNF480Q8WV37 535 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 CARD11Q9BXL7 1154 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 B3GNT5Q9BYG0 378 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 MANSC1Q9H8J5 431 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 C14orf93Q9H972 538 aaKnown RBP6.9□□□□□ -1.3
BRAF-203ENST00000479537 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
BRAF-203ENST00000479537 STXBP5LQ9Y2K9 1186 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 RNF114Q9Y508 228 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 NR2E3Q9Y5X4 410 aa6.9□□□□□ -1.3
BRAF-203ENST00000479537 ZBED1O96006 694 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 GLDCP23378 1020 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 MCTP2Q6DN12 878 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 ATG14Q6ZNE5 492 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 Q6ZUG5 572 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 TAS1R1Q7RTX1 841 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 GPR155Q7Z3F1 870 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 CLEC14AQ86T13 490 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 MSL3Q8N5Y2 521 aaKnown RBP6.89□□□□□ -1.31
BRAF-203ENST00000479537 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRAF-203ENST00000479537 CCHCR1Q8TD31 782 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 MORC4Q8TE76 937 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
BRAF-203ENST00000479537 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 CLPTM1LQ96KA5 538 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 SPATA25Q9BR10 227 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.89□□□□□ -1.31
BRAF-203ENST00000479537 ZDHHC9Q9Y397 364 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 COMMD10Q9Y6G5 202 aa6.89□□□□□ -1.31
BRAF-203ENST00000479537 PMM2O15305 246 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 PAX4O43316 350 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 MYL3P08590 195 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 PHKG2P15735 406 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 SYN1P17600 705 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 IL12RB1P42701 662 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
BRAF-203ENST00000479537 MAP2K6P52564 334 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 FAM193AP78312 1265 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 USP10Q14694 798 aaKnown RBP6.88□□□□□ -1.31
BRAF-203ENST00000479537 MST1LQ2TV78 715 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 ZNF568Q3ZCX4 644 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 GORABQ5T7V8 394 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 DARS2Q6PI48 645 aaKnown RBP6.88□□□□□ -1.31
BRAF-203ENST00000479537 NPNTQ6UXI9 565 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 GADL1Q6ZQY3 521 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 SAPCD2Q86UD0 394 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 PQLC1Q8N2U9 271 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 SAMD3Q8N6K7 520 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 PLA2G15Q8NCC3 412 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 KLHDC4Q8TBB5 520 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 CDK5RAP3Q96JB5 506 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 SENP6Q9GZR1 1112 aaPredicted RBP6.88□□□□□ -1.31
BRAF-203ENST00000479537 ZNF700Q9H0M5 742 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 LDAHQ9H6V9 325 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
BRAF-203ENST00000479537 ING3Q9NXR8 418 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 PTPN22Q9Y2R2 807 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 PCDHGB6Q9Y5F9 930 aa6.88□□□□□ -1.31
BRAF-203ENST00000479537 ANO9A1A5B4 782 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 CAPN8A6NHC0 703 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 LRRC14BA6NHZ5 514 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 PQBP1O60828 265 aaKnown RBP6.87□□□□□ -1.31
BRAF-203ENST00000479537 ZNF888P0CJ79 500 aaPredicted RBP6.87□□□□□ -1.31
BRAF-203ENST00000479537 CDC42EP1Q00587 391 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 DSC2Q02487 901 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 DUSP2Q05923 314 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 C19orf54Q5BKX5 351 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 ZMAT1Q5H9K5 638 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 TRIM68Q6AZZ1 485 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 Q6ZVL8 140 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 ZDHHC14Q8IZN3 488 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 ADGRG2Q8IZP9 1017 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 FBXO41Q8TF61 875 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 SLC7A6OSQ96CW6 309 aaPredicted RBP6.87□□□□□ -1.31
BRAF-203ENST00000479537 FAM84AQ96KN4 292 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 YTHDC1Q96MU7 727 aaKnown RBP6.87□□□□□ -1.31
BRAF-203ENST00000479537 PDCD2LQ9BRP1 358 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 MYH16Q9H6N6 1097 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 ARMT1Q9H993 441 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 EPB41L4AQ9HCS5 686 aaPredicted RBP6.87□□□□□ -1.31
BRAF-203ENST00000479537 NCDNQ9UBB6 729 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 POLHQ9Y253 713 aa6.87□□□□□ -1.31
BRAF-203ENST00000479537 PCDHB1Q9Y5F3 818 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms