RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 NIPA1Q7RTP0 329 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 VSIG10LQ86VR7 867 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 NOSTRINQ8IVI9 506 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 FBXO16Q8IX29 292 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 TMEM102Q8N9M5 508 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 ASAP3Q8TDY4 903 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 SREK1Q8WXA9 508 aaKnown RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 NXPE3Q969Y0 559 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 ARMC5Q96C12 935 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 GPRASP2Q96D09 838 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 FGD4Q96M96 766 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 MXRA8Q9BRK3 442 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 PBX4Q9BYU1 374 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 BHLHE41Q9C0J9 482 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 AP5M1Q9H0R1 490 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 TSPYL1Q9H0U9 437 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 RNF208Q9H0X6 261 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 ZSCAN16Q9H4T2 348 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 GJB4Q9NTQ9 266 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 PPM1HQ9ULR3 514 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 ZEB2O60315 1214 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCNT1O60563 726 aaKnown RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 WNT11O96014 354 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 TXNP10599 105 aaKnown RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCL5P13501 91 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CPB1P15086 417 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 U2AF2P26368 475 aaKnown RBP eCLIP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCND3P30281 292 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ICAM3P32942 547 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCDC173Q0VFZ6 552 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ORC2Q13416 577 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 NEDD9Q14511 834 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 NPY5RQ15761 445 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CEP55Q53EZ4 464 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 RILPL1Q5EBL4 403 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 PRAMEF19Q5SWL8 479 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 MAP3K21Q5TCX8 1036 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ERMP1Q7Z2K6 904 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 FAM35AQ86V20 835 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 PLA2G4DQ86XP0 818 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CREBRFQ8IUR6 639 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 OR6J1Q8NGC5 347 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 IL31RAQ8NI17 732 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 SHISA4Q96DD7 197 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ZNF333Q96JL9 665 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 INPP4AQ96PE3 977 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 SDF4Q9BRK5 362 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 NOC4LQ9BVI4 516 aaKnown RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CCDC94Q9BW85 323 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 WDR11Q9BZH6 1224 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 MLXIPQ9HAP2 919 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 JADE2Q9NQC1 790 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 RTEL1Q9NZ71 1219 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 DDX20Q9UHI6 824 aaKnown RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 DDX25Q9UHL0 483 aaKnown RBP6.95□□□□□ -1.3
SF3B1-209ENST00000479532 CEP131Q9UPN4 1083 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 Q9Y3F1 56 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ATP6V1DQ9Y5K8 247 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 UBIAD1Q9Y5Z9 338 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 ASTN1O14525 1302 aa6.95□□□□□ -1.3
SF3B1-209ENST00000479532 PCNTO95613 3336 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 MYH15Q9Y2K3 1946 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 CYP3A7-CYP3A51PA0A087WV96 503 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 A0A096LPE4 126 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 A0A1W2PPZ6 126 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 NOP56O00567 594 aaKnown RBP6.94□□□□□ -1.3
SF3B1-209ENST00000479532 NEMFO60524 1076 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 DUSP11O75319 330 aaKnown RBP6.94□□□□□ -1.3
SF3B1-209ENST00000479532 BMP15O95972 392 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 GH1P01241 217 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 ZNF865P0CJ78 1059 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-209ENST00000479532 ATP2B1P20020 1258 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 ITPKAP23677 461 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 CYP3A7P24462 503 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 CIITAP33076 1130 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 ADCYAP1R1P41586 468 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 CPT1AP50416 773 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 NUCB2P80303 420 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 MRPS9P82933 396 aaKnown RBP6.94□□□□□ -1.3
SF3B1-209ENST00000479532 Q4G0T1 1027 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 DUSP28Q4G0W2 176 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 PRR16Q569H4 304 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 TTC38Q5R3I4 469 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 AXDND1Q5T1B0 1012 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-209ENST00000479532 PPP4R3AQ6IN85 833 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 OGFOD2Q6N063 350 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 TAPT1Q6NXT6 567 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 RNF180Q86T96 592 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 TLK2Q86UE8 772 aa6.94□□□□□ -1.3
SF3B1-209ENST00000479532 DHX37Q8IY37 1157 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms