RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NUCB1Q02818 461 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 KCNAB2Q13303 367 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 TNFAIP1Q13829 316 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 GORABQ5T7V8 394 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 SPTY2D1Q68D10 685 aaPredicted RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 CDC42EP5Q6NZY7 148 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 DLK2Q6UY11 383 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 SAPCD2Q86UD0 394 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 DZIP1Q86YF9 867 aaKnown RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 OTUD7AQ8TE49 926 aaPredicted RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 DCAF4Q8WV16 495 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 DCPSQ96C86 337 aaKnown RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 MTA3Q9BTC8 594 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 PHF20Q9BVI0 1012 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 DEFB129Q9H1M3 183 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 CRTAC1Q9NQ79 661 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS45-207ENST00000477558 TIMM13Q9Y5L4 95 aaPredicted RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 ATAD5Q96QE3 1844 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 CLRN2A0PK11 232 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 MYO1BO43795 1136 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 MX1P20591 662 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 CBX2Q14781 532 aaPredicted RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 TTF1Q15361 905 aaPredicted RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 ZC3H12BQ5HYM0 836 aaKnown RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 TEX2Q8IWB9 1127 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 LZTR1Q8N653 840 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 PLEKHO2Q8TD55 490 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 INTS4Q96HW7 963 aaKnown RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 RIOK1Q9BRS2 568 aaKnown RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 RWDD1Q9H446 243 aaPredicted RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 TDRD3Q9H7E2 651 aaKnown RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 PAG1Q9NWQ8 432 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 MARCH2Q9P0N8 246 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 ABCF2Q9UG63 623 aa6.28□□□□□ -1.4
VPS45-207ENST00000477558 GREB1LQ9C091 1923 aaPredicted RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 BAZ2AQ9UIF9 1905 aaKnown RBP6.28□□□□□ -1.4
VPS45-207ENST00000477558 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 PPP1R12AO14974 1030 aaPredicted RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 ENTPD3O75355 529 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 GLRX3O76003 335 aaKnown RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 CELF2O95319 508 aaKnown RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 PDE6AP16499 860 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 FPR2P25090 351 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 ADD2P35612 726 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 BTDP43251 543 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 PDE1AP54750 535 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 CORO7P57737 925 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 RPL11P62913 178 aaKnown RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 IRX6P78412 446 aaPredicted RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 GSTO1P78417 241 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 HTRA3P83110 453 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 ADGRF1Q5T601 910 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 MPZL3Q6UWV2 235 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 CEP68Q76N32 757 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 CHD1LQ86WJ1 897 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 TICAM2Q86XR7 235 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 CERS3Q8IU89 383 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 USP33Q8TEY7 942 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 FAM151AQ8WW52 585 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 EDC3Q96F86 508 aaKnown RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 CHAMP1Q96JM3 812 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 RXFP1Q9HBX9 757 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 DDX4Q9NQI0 724 aaKnown RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 GPR27Q9NS67 375 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 FANCLQ9NW38 375 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 TMEM260Q9NX78 707 aa6.27□□□□□ -1.41
VPS45-207ENST00000477558 SCAF8Q9UPN6 1271 aaKnown RBP6.27□□□□□ -1.41
VPS45-207ENST00000477558 LAMA4Q16363 1823 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 A0A1W2PQJ5 194 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 GOLIM4O00461 696 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 LDHCP07864 332 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 CACNB3P54284 484 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 MAP3K12Q12852 859 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 UBE3CQ15386 1083 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 ANKRD45Q5TZF3 282 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 TSHZ3Q63HK5 1081 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 BICRALQ6AI39 1079 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 NAA16Q6N069 864 aaPredicted RBP6.26□□□□□ -1.41
VPS45-207ENST00000477558 KBTBD3Q8NAB2 608 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 SLC7A14Q8TBB6 771 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 PTPRN2Q92932 1015 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 GPATCH3Q96I76 525 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 TMEM39BQ9GZU3 492 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 BOLA2Q9H3K6 86 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 GBA2Q9HCG7 927 aaPredicted RBP6.26□□□□□ -1.41
VPS45-207ENST00000477558 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS45-207ENST00000477558 RAI14Q9P0K7 980 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
VPS45-207ENST00000477558 LOC285556D6RIA3 1793 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 FLT1P17948 1338 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 MYH8P13535 1937 aa6.26□□□□□ -1.41
VPS45-207ENST00000477558 C22orf46C9J442 243 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ERC2O15083 957 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 EIF5BO60841 1220 aaKnown RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 IDH1O75874 414 aaKnown RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 ASMTLO95671 621 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 CHGBP05060 677 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms