RNA–Protein interactions for RNA: ENST00000477120.1

PSMD1-209, Transcript of proteasome 26S subunit, non-ATPase 1, human

TSL 2

Gene PSMD1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD1-209	ENST00000477120	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	OXSM	Q9NWU1	459 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	TRPM5	Q9NZQ8	1165 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	HDAC5	Q9UQL6	1122 aa		4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMD1-209	ENST00000477120	NCR1	O76036	304 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	KRTAP10-11	P60412	298 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	PRR16	Q569H4	304 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	RD3	Q7Z3Z2	195 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	KIF18B	Q86Y91	864 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	LCORL	Q8N3X6	602 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	NELL1	Q92832	810 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	PRDM13	Q9H4Q3	707 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	PODXL2	Q9NZ53	605 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	ANKFY1	Q9P2R3	1169 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	INSL6	Q9Y581	213 aa		4.1	□□□□□ -1.75
PSMD1-209	ENST00000477120	PIPSL	A2A3N6	862 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	PRR5-ARHGAP8	B1AHC4	643 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120		E9PSI1	815 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	ELL2	O00472	640 aa	Predicted RBP	4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	NRP2	O60462	931 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	RFPL3	O75679	317 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	PCDH8	O95206	1070 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	PFKM	P08237	780 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	JMJD7	P0C870	316 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	HKR1	P10072	659 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	HSP90B1	P14625	803 aa	Known RBP	4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZNF37A	P17032	561 aa	Predicted RBP	4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZSCAN20	P17040	1043 aa	Predicted RBP	4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	SEC24C	P53992	1094 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	DUSP2	Q05923	314 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	ERCC6L	Q2NKX8	1250 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	CFAP100	Q494V2	611 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	ESPNL	Q6ZVH7	1005 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	EFHB	Q8N7U6	833 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	R3HDML	Q9H3Y0	253 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	INTS7	Q9NVH2	962 aa	Known RBP	4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	ZKSCAN5	Q9Y2L8	839 aa		4.09	□□□□□ -1.75
PSMD1-209	ENST00000477120	COL11A2	P13942	1736 aa	Predicted RBP	4.09	□□□□□ -1.76
PSMD1-209	ENST00000477120	ST20-MTHFS	A0A0A6YYL1	179 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120		A0A1W2PR48	441 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	LEFTY2	O00292	366 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	CDK4	P11802	303 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	ATP2A2	P16615	1042 aa	Known RBP	4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	XPA	P23025	273 aa	Predicted RBP	4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	MGAT1	P26572	445 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	NHLH2	Q02577	135 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	GPR158	Q5T848	1215 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	ABHD17B	Q5VST6	288 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	BTNL9	Q6UXG8	535 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	PASD1	Q8IV76	773 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	MSL3	Q8N5Y2	521 aa	Known RBP	4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	SLC9A6	Q92581	669 aa		4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.08	□□□□□ -1.76
PSMD1-209	ENST00000477120	MARCH11	A6NNE9	402 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120		B5MCH6	92 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	ZNF185	O15231	689 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	NDUFA10	O95299	355 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	F2	P00734	622 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	HLA-DOA	P06340	250 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	SPATA31D3	P0C874	917 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	SDS	P20132	328 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	ELL	P55199	621 aa	Predicted RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	NRG3	P56975	720 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	RNASE9	P60153	205 aa	Known RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	GUCY1B3	Q02153	619 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	FOXI1	Q12951	378 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	DDB1	Q16531	1140 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	ZBTB41	Q5SVQ8	909 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	ARMC6	Q6NXE6	501 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	FBXO42	Q6P3S6	717 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	SPATA31D4	Q6ZUB0	917 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	XYLT1	Q86Y38	959 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	SYT12	Q8IV01	421 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	CMTR2	Q8IYT2	770 aa	Known RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	CPEB3	Q8NE35	698 aa	Known RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	GAB3	Q8WWW8	586 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	RSAD2	Q8WXG1	361 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	CAVIN3	Q969G5	261 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	IFT57	Q9NWB7	429 aa		4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	POLR2A	P24928	1970 aa	Known RBP	4.07	□□□□□ -1.76
PSMD1-209	ENST00000477120	SPATA31A6	Q5VVP1	1343 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	GAS7	O60861	476 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	RBP3	P10745	1247 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	DDX6	P26196	483 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	PHC1	P78364	1004 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	MEF2A	Q02078	507 aa	Predicted RBP	4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	APBA1	Q02410	837 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	DSG1	Q02413	1049 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	SQSTM1	Q13501	440 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	C19orf54	Q5BKX5	351 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	LMBR1L	Q6UX01	489 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	FAM98A	Q8NCA5	519 aa	Known RBP	4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	SIMC1	Q8NDZ2	872 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	OR10H5	Q8NGA6	315 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	PMFBP1	Q8TBY8	1022 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	FERMT2	Q96AC1	680 aa		4.06	□□□□□ -1.76
PSMD1-209	ENST00000477120	ZNF496	Q96IT1	587 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms