RNA–Protein interactions for RNA: ENST00000477120.1

PSMD1-209, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-209ENST00000477120 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
PSMD1-209ENST00000477120 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
PSMD1-209ENST00000477120 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
PSMD1-209ENST00000477120 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
PSMD1-209ENST00000477120 FOXD1Q16676 465 aa16.99■□□□□ 0.31
PSMD1-209ENST00000477120 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
PSMD1-209ENST00000477120 MSH5O43196 834 aa15.94■□□□□ 0.14
PSMD1-209ENST00000477120 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
PSMD1-209ENST00000477120 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
PSMD1-209ENST00000477120 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
PSMD1-209ENST00000477120 ADRA2BP18089 450 aa15.83■□□□□ 0.12
PSMD1-209ENST00000477120 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
PSMD1-209ENST00000477120 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
PSMD1-209ENST00000477120 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
PSMD1-209ENST00000477120 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
PSMD1-209ENST00000477120 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
PSMD1-209ENST00000477120 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
PSMD1-209ENST00000477120 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
PSMD1-209ENST00000477120 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
PSMD1-209ENST00000477120 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
PSMD1-209ENST00000477120 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
PSMD1-209ENST00000477120 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
PSMD1-209ENST00000477120 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
PSMD1-209ENST00000477120 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
PSMD1-209ENST00000477120 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
PSMD1-209ENST00000477120 KCNA4P22459 653 aa13.28□□□□□ -0.28
PSMD1-209ENST00000477120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
PSMD1-209ENST00000477120 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
PSMD1-209ENST00000477120 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
PSMD1-209ENST00000477120 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
PSMD1-209ENST00000477120 CAPN15O75808 1086 aa12.77□□□□□ -0.37
PSMD1-209ENST00000477120 DSG3P32926 999 aa12.72□□□□□ -0.37
PSMD1-209ENST00000477120 APLP2Q06481 763 aa12.72□□□□□ -0.37
PSMD1-209ENST00000477120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.37
PSMD1-209ENST00000477120 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.37
PSMD1-209ENST00000477120 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
PSMD1-209ENST00000477120 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
PSMD1-209ENST00000477120 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
PSMD1-209ENST00000477120 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
PSMD1-209ENST00000477120 MYCNP04198 464 aaPredicted RBP12.54□□□□□ -0.4
PSMD1-209ENST00000477120 ABCB7O75027 752 aa12.45□□□□□ -0.42
PSMD1-209ENST00000477120 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
PSMD1-209ENST00000477120 POLA2Q14181 598 aa12.26□□□□□ -0.45
PSMD1-209ENST00000477120 ZBTB22O15209 634 aa12.2□□□□□ -0.46
PSMD1-209ENST00000477120 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
PSMD1-209ENST00000477120 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
PSMD1-209ENST00000477120 POTEHQ6S545 545 aa12.16□□□□□ -0.46
PSMD1-209ENST00000477120 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
PSMD1-209ENST00000477120 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
PSMD1-209ENST00000477120 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
PSMD1-209ENST00000477120 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
PSMD1-209ENST00000477120 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
PSMD1-209ENST00000477120 FBLN2P98095 1184 aa11.76□□□□□ -0.53
PSMD1-209ENST00000477120 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
PSMD1-209ENST00000477120 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
PSMD1-209ENST00000477120 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
PSMD1-209ENST00000477120 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
PSMD1-209ENST00000477120 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
PSMD1-209ENST00000477120 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
PSMD1-209ENST00000477120 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
PSMD1-209ENST00000477120 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
PSMD1-209ENST00000477120 FXR2P51116 673 aaKnown RBP eCLIP11.54□□□□□ -0.56
PSMD1-209ENST00000477120 SSUH2Q9Y2M2 353 aa11.53□□□□□ -0.56
PSMD1-209ENST00000477120 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
PSMD1-209ENST00000477120 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
PSMD1-209ENST00000477120 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
PSMD1-209ENST00000477120 SP7Q8TDD2 431 aaPredicted RBP11.39□□□□□ -0.59
PSMD1-209ENST00000477120 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
PSMD1-209ENST00000477120 HAX1O00165 279 aa11.34□□□□□ -0.59
PSMD1-209ENST00000477120 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
PSMD1-209ENST00000477120 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
PSMD1-209ENST00000477120 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
PSMD1-209ENST00000477120 EVX2Q03828 476 aa11.18□□□□□ -0.62
PSMD1-209ENST00000477120 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
PSMD1-209ENST00000477120 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
PSMD1-209ENST00000477120 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
PSMD1-209ENST00000477120 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
PSMD1-209ENST00000477120 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
PSMD1-209ENST00000477120 GABBR2O75899 941 aa10.97□□□□□ -0.65
PSMD1-209ENST00000477120 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
PSMD1-209ENST00000477120 CD44P16070 742 aaKnown RBP10.96□□□□□ -0.65
PSMD1-209ENST00000477120 PROM2Q8N271 834 aa10.92□□□□□ -0.66
PSMD1-209ENST00000477120 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
PSMD1-209ENST00000477120 CLCN6P51797 869 aa10.91□□□□□ -0.66
PSMD1-209ENST00000477120 ZNF579Q8NAF0 562 aaKnown RBP10.82□□□□□ -0.68
PSMD1-209ENST00000477120 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
PSMD1-209ENST00000477120 ZRANB1Q9UGI0 708 aa10.8□□□□□ -0.68
PSMD1-209ENST00000477120 NPM1P06748 294 aaKnown RBP eCLIP10.79□□□□□ -0.68
PSMD1-209ENST00000477120 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
PSMD1-209ENST00000477120 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
PSMD1-209ENST00000477120 LHX8Q68G74 356 aa10.67□□□□□ -0.7
PSMD1-209ENST00000477120 DCBLD2Q96PD2 775 aa10.67□□□□□ -0.7
PSMD1-209ENST00000477120 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
PSMD1-209ENST00000477120 PHF12Q96QT6 1004 aa10.63□□□□□ -0.71
PSMD1-209ENST00000477120 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
PSMD1-209ENST00000477120 MIER1Q8N108 512 aa10.6□□□□□ -0.71
PSMD1-209ENST00000477120 FKBP8Q14318 412 aa10.58□□□□□ -0.72
PSMD1-209ENST00000477120 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
PSMD1-209ENST00000477120 TSPYL2Q9H2G4 693 aaPredicted RBP10.53□□□□□ -0.72
PSMD1-209ENST00000477120 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms