RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 DSG1Q02413 1049 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 PALB2Q86YC2 1186 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 RASEFQ8IZ41 740 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 PLEKHA4Q9H4M7 779 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 MINDY3Q9H8M7 445 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 COL4A3BPQ9Y5P4 624 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 CACNA1IQ9P0X4 2223 aa18.43■□□□□ 0.54
APOBEC3F-203ENST00000476513 F8W810 466 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 GAS2O43903 313 aaKnown RBP18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 KINO60870 393 aaKnown RBP18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 DSC1Q08554 894 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 TSGA10IPQ3SY00 556 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 Q4G0T1 1027 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 PLA2G4FQ68DD2 849 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 SRGAP1Q7Z6B7 1085 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 SMG8Q8ND04 991 aaKnown RBP18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 PHKBQ93100 1093 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 JPH2Q9BR39 696 aaPredicted RBP18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 RPP25Q9BUL9 199 aaKnown RBP18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 PRKD2Q9BZL6 878 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 ZDHHC7Q9NXF8 308 aa18.42■□□□□ 0.54
APOBEC3F-203ENST00000476513 SPTBN2O15020 2390 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 FANCMQ8IYD8 2048 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 TGM5O43548 720 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 C1RP00736 705 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 GPC5P78333 572 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 LILRA6Q6PI73 481 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 SHDQ96IW2 340 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 B3GALT6Q96L58 329 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 RNF39Q9H2S5 420 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 UBN1Q9NPG3 1134 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 CHST7Q9NS84 486 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 ACACBO00763 2458 aa18.41■□□□□ 0.54
APOBEC3F-203ENST00000476513 ARL5CA6NH57 179 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 TDP2O95551 362 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 SRGAP2CP0DJJ0 459 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 ITGA4P13612 1032 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 NPEPPSP55786 919 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 PSMC5P62195 406 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 ZNF528Q3MIS6 628 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 VARS2Q5ST30 1063 aaKnown RBP18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 GLYCTKQ8IVS8 523 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 ZNF579Q8NAF0 562 aaKnown RBP18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 CNNM3Q8NE01 707 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 TBCKQ8TEA7 893 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 PRPF31Q8WWY3 499 aaKnown RBP18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 TMEM143Q96AN5 459 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 GAD1Q99259 594 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 IPPQ9Y573 584 aa18.4■□□□□ 0.54
APOBEC3F-203ENST00000476513 CYP3A7-CYP3A51PA0A087WV96 503 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 KANSL1LA0AUZ9 987 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 FSHRP23945 695 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 CYP3A7P24462 503 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 MLH1P40692 756 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 SCNN1GP51170 649 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 FGD1P98174 961 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 SNW1Q13573 536 aaKnown RBP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 PARM1Q6UWI2 310 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 ETNPPLQ8TBG4 499 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 PSPC1Q8WXF1 523 aaKnown RBP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 FGF14Q92915 247 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 EIF2AQ9BY44 585 aaKnown RBP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 GPR62Q9BZJ7 368 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 SPATA6Q9NWH7 488 aaPredicted RBP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 FNIP2Q9P278 1114 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 NCDNQ9UBB6 729 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 FBXO4Q9UKT5 387 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 ZFP37Q9Y6Q3 630 aaPredicted RBP18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 NID2Q14112 1375 aa18.39■□□□□ 0.53
APOBEC3F-203ENST00000476513 SPTLC1O15269 473 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 LAMTOR5O43504 91 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 ZMYND10O75800 440 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 CPA1P15085 419 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 RPL17P18621 184 aaKnown RBP18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 KRT32Q14532 448 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 NTRK3Q16288 839 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 GPR65Q8IYL9 337 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 BORCS6Q96GS4 357 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 ZFP42Q96MM3 310 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 DDX23Q9BUQ8 820 aaKnown RBP18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 COLEC11Q9BWP8 271 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 BCO2Q9BYV7 579 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 DHX33Q9H6R0 707 aaKnown RBP18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 CDH7Q9ULB5 785 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 MTF2Q9Y483 593 aaPredicted RBP18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 HES2Q9Y543 173 aa18.38■□□□□ 0.53
APOBEC3F-203ENST00000476513 EML1O00423 815 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 NR1I2O75469 434 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 ATXN1P54253 815 aaKnown RBP18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 NLRP5P59047 1200 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 CSTF1Q05048 431 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms