RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 OTUD6AQ7L8S5 288 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 ZBTB33Q86T24 672 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 CABP7Q86V35 215 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 TMEM105Q8N8V8 129 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 TDRD5Q8NAT2 981 aaKnown RBP14.62□□□□□ -0.07
MRPL55-228ENST00000476267 GSTCDQ8NEC7 633 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 ASAP3Q8TDY4 903 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 HERC2P3Q9BVR0 1158 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 NFKBIZQ9BYH8 718 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 MIOSQ9NXC5 875 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 ORC3Q9UBD5 711 aaPredicted RBP14.62□□□□□ -0.07
MRPL55-228ENST00000476267 DBR1Q9UK59 544 aaKnown RBP14.62□□□□□ -0.07
MRPL55-228ENST00000476267 FAN1Q9Y2M0 1017 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 ARL5CA6NH57 179 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 ALDH2P05091 517 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 KRT2P35908 639 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 ARL2P36404 184 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 MXD4Q14582 209 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-228ENST00000476267 ME3Q16798 604 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 KIAA0319Q5VV43 1072 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 C15orf39Q6ZRI6 1047 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 TAS1R1Q7RTX1 841 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 CMASQ8NFW8 434 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-228ENST00000476267 GTF3C6Q969F1 213 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 CCDC51Q96ER9 411 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 MTMR9Q96QG7 549 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 EIF2AK1Q9BQI3 630 aaKnown RBP14.61□□□□□ -0.07
MRPL55-228ENST00000476267 EMILIN2Q9BXX0 1053 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 RHOBTB2Q9BYZ6 727 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 CSRNP2Q9H175 543 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 UBN1Q9NPG3 1134 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 LIMD1Q9UGP4 676 aa14.61□□□□□ -0.07
MRPL55-228ENST00000476267 F8W810 466 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 N4BP1O75113 896 aaKnown RBP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 DGAT1O75907 488 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 ERLIN2O94905 339 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 ITGA4P13612 1032 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 ARF4P18085 180 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 GLRA2P23416 452 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 MLH1P40692 756 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 RARRES1P49788 294 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 NOTUMQ6P988 496 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 TPH2Q8IWU9 490 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 NSUN7Q8NE18 718 aaKnown RBP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 WASF1Q92558 559 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 CPB2Q96IY4 423 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 FAM193BQ96PV7 902 aaPredicted RBP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 GAD1Q99259 594 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 RXFP1Q9HBX9 757 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 MRPL17Q9NRX2 175 aaKnown RBP14.6□□□□□ -0.07
MRPL55-228ENST00000476267 CHST7Q9NS84 486 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 ANKEF1Q9NU02 776 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 FAM86C1Q9NVL1 165 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 PCDHA12Q9UN75 941 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 HES2Q9Y543 173 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 MYO10Q9HD67 2058 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 ZMYM2Q9UBW7 1377 aa14.6□□□□□ -0.07
MRPL55-228ENST00000476267 PROB1E7EW31 1015 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 TEX28O15482 410 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 BAG4O95429 457 aaKnown RBP14.59□□□□□ -0.07
MRPL55-228ENST00000476267 KLRC2P26717 231 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 SCNN1GP51170 649 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 DSG1Q02413 1049 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 ST3GAL1Q11201 340 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
MRPL55-228ENST00000476267 NECAB1Q8N987 351 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 NXF3Q9H4D5 531 aaKnown RBP14.59□□□□□ -0.07
MRPL55-228ENST00000476267 TTC12Q9H892 705 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-228ENST00000476267 MAN1C1Q9NR34 630 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 PRG3Q9Y2Y8 225 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-228ENST00000476267 VPS13AQ96RL7 3174 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 CFAP54Q96N23 3096 aa14.59□□□□□ -0.07
MRPL55-228ENST00000476267 MTCL1Q9Y4B5 1905 aaKnown RBP14.58□□□□□ -0.07
MRPL55-228ENST00000476267 A0A1B0GUA9 196 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 BTBD18B2RXH4 712 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 INO80B-WBP1J3KQ70 363 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 B4GALT5O43286 388 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 MARCH6O60337 910 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 URODP06132 367 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 GLUD2P49448 558 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 TFDP1Q14186 410 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 ANKRD1Q15327 319 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 CALCRLQ16602 461 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 CCDC149Q6ZUS6 474 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 IRF2BPLQ9H1B7 796 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 GIT1Q9Y2X7 761 aa14.58□□□□□ -0.08
MRPL55-228ENST00000476267 H0Y858 1186 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 C2CD2LO14523 706 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 ST18O60284 1047 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 NEMFO60524 1076 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 C1RP00736 705 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 SPATA31C1P0DKV0 1188 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 NPR3P17342 541 aa14.57□□□□□ -0.08
MRPL55-228ENST00000476267 OR1G1P47890 313 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms