RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 UHRF1Q96T88 793 aaPredicted RBP7.44□□□□□ -1.22
TM9SF3-204ENST00000475401 DEF6Q9H4E7 631 aa7.44□□□□□ -1.22
TM9SF3-204ENST00000475401 PLA2G3Q9NZ20 509 aa7.44□□□□□ -1.22
TM9SF3-204ENST00000475401 FAM171A2A8MVW0 826 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 TMEM127O75204 238 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 NDUFS2O75306 463 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 ADSLP30566 484 aaPredicted RBP7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 MCAMP43121 646 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 SAFB2Q14151 953 aaKnown RBP eCLIP7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 NOMO1Q15155 1222 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 MFSD5Q6N075 450 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 ABHD15Q6UXT9 468 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 FUKQ8N0W3 1084 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 D2HGDHQ8N465 521 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 FAM89AQ96GI7 184 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 TEKT5Q96M29 485 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 MPHOSPH9Q99550 1183 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 LUC7L2Q9Y383 392 aaKnown RBP7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 TCAF1Q9Y4C2 921 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 SLC30A1Q9Y6M5 507 aa7.43□□□□□ -1.22
TM9SF3-204ENST00000475401 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 ZNF623O75123 536 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 ENDOD1O94919 500 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 CT47B1P0C2W7 299 aaPredicted RBP7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 COMTP21964 271 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 CRHR1P34998 444 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 MSX2P35548 267 aaPredicted RBP7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 CASRP41180 1078 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 TTF1Q15361 905 aaPredicted RBP7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 ODR4Q5SWX8 454 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 IL17RAQ96F46 866 aa7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 SSBP3Q9BWW4 388 aaPredicted RBP7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 AGO3Q9H9G7 860 aaKnown RBP7.42□□□□□ -1.22
TM9SF3-204ENST00000475401 E2F8A0AVK6 867 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 FOXS1O43638 330 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 PCDHGA12O60330 932 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 ITGA10O75578 1167 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 GZMKP49863 264 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 EPHB1P54762 984 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 ADAM8P78325 824 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 MST1LQ2TV78 715 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 MIGA2Q7L4E1 593 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 THEMISQ8N1K5 641 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 MIER2Q8N344 545 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 TTC9BQ8N6N2 239 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 C7orf25Q9BPX7 421 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 CSRNP2Q9H175 543 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 BCO1Q9HAY6 547 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 DMRT3Q9NQL9 472 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 GPRC5DQ9NZD1 345 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 SCOCQ9UIL1 159 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 HDAC5Q9UQL6 1122 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 PCDHGA9Q9Y5G4 932 aaKnown RBP7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 PCDHGA8Q9Y5G5 932 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 PCDHGA7Q9Y5G6 932 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 PCDHGA6Q9Y5G7 932 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 PCDHGA3Q9Y5H0 932 aa7.41□□□□□ -1.22
TM9SF3-204ENST00000475401 FZD9O00144 591 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 MFAP3LO75121 409 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 IPO13O94829 963 aaKnown RBP7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 GNAT2P19087 354 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 VCAM1P19320 739 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 C5AR1P21730 350 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 KIF23Q02241 960 aaPredicted RBP7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 APBA1Q02410 837 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 MGAT2Q10469 447 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 DUSP8Q13202 625 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 PLEKHG6Q3KR16 790 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 SGMS1Q86VZ5 419 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 ANKRD35Q8N283 1001 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 INTUQ9ULD6 942 aa7.4□□□□□ -1.22
TM9SF3-204ENST00000475401 CYP27B1O15528 508 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 PTPN7P35236 360 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 FOXL1Q12952 345 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 UAP1L1Q3KQV9 507 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 GSPT2Q8IYD1 628 aaKnown RBP7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 OR7D4Q8NG98 312 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 Q8TCH9 128 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 NRG4Q8WWG1 115 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 HOOK2Q96ED9 719 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 ZNF512Q96ME7 567 aaPredicted RBP7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 PUS7Q96PZ0 661 aaKnown RBP7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 MANSC1Q9H8J5 431 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 GIT1Q9Y2X7 761 aa7.39□□□□□ -1.23
TM9SF3-204ENST00000475401 CAPN14A8MX76 684 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 HOXA3O43365 443 aaPredicted RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 IL33O95760 270 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 RPLP2P05387 115 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 HSP90B1P14625 803 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 ADKP55263 362 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 ICAM4Q14773 271 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 ELAVL1Q15717 326 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 TMEM240Q5SV17 173 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 PPP4R3AQ6IN85 833 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 PQLC1Q8N2U9 271 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms