RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 BMT2Q1RMZ1 405 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 DCAF4L1Q3SXM0 396 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 C9orf50Q5SZB4 431 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 KIAA0895Q8NCT3 520 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 CPB2Q96IY4 423 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 SLC9A7Q96T83 725 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 TARS2Q9BW92 718 aaKnown RBP15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 PRO3102Q9H379 93 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 SLC39A2Q9NP94 309 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 KIAA1468Q9P260 1216 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 SLC4A7Q9Y6M7 1214 aa15.1■□□□□ 0.01
ERGIC3-213ENST00000475211 MICAL3Q7RTP6 2002 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 A0A0U1RQF3 1178 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 A0A1W2PPC1 479 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 STAG3L1P0CL83 205 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 FAM189BP81408 668 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 SHHQ15465 462 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 RTN4RL1Q86UN2 441 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 NPAS4Q8IUM7 802 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 HACE1Q8IYU2 909 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 TDHQ8IZJ6 230 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 SYCP3Q8IZU3 236 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 TRIML1Q8N9V2 468 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 PHOSPHO2Q8TCD6 241 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 ZNF507Q8TCN5 953 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 SCFD1Q8WVM8 642 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 SYAP1Q96A49 352 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 TRIM6Q9C030 488 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 ELAC1Q9H777 363 aaKnown RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 FAM105AQ9NUU6 356 aa15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-213ENST00000475211 ZNF623O75123 536 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 PRPF6O94906 941 aaKnown RBP15.08■□□□□ 0
ERGIC3-213ENST00000475211 EOMESO95936 686 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 MCF2P10911 925 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 PROZP22891 400 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 SKOR2Q2VWA4 1001 aaPredicted RBP15.08■□□□□ 0
ERGIC3-213ENST00000475211 ZNF568Q3ZCX4 644 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 COBLL1Q53SF7 1204 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 UBXN11Q5T124 520 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 CCDC183Q5T5S1 534 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 ZNF658Q5TYW1 1059 aaPredicted RBP15.08■□□□□ 0
ERGIC3-213ENST00000475211 SLFN12LQ6IEE8 588 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 MPZL3Q6UWV2 235 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.08■□□□□ 01e-6■■■□□ 15.9
ERGIC3-213ENST00000475211 MYOCDQ8IZQ8 938 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 GUF1Q8N442 669 aaKnown RBP15.08■□□□□ 0
ERGIC3-213ENST00000475211 GLIS3Q8NEA6 775 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 RSPH1Q8WYR4 309 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 TCHPQ9BT92 498 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 PTPRHQ9HD43 1115 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 TMEM161AQ9NX61 479 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 MAN1B1Q9UKM7 699 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 PCDHB2Q9Y5E7 798 aa15.08■□□□□ 0
ERGIC3-213ENST00000475211 ABLIM1O14639 778 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 CLDN3O15551 220 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 HOXA2O43364 376 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 NPTXRO95502 500 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 ATP2A2P16615 1042 aaKnown RBP15.07■□□□□ 0
ERGIC3-213ENST00000475211 PPP1R2P41236 205 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 SNRPFP62306 86 aaKnown RBP15.07■□□□□ 0
ERGIC3-213ENST00000475211 DEFB103AP81534 67 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 MCL1Q07820 350 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 KCNA1Q09470 495 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
ERGIC3-213ENST00000475211 KNOP1Q1ED39 458 aaKnown RBP15.07■□□□□ 0
ERGIC3-213ENST00000475211 EEF1DP3Q658K8 133 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 HS2ST1Q7LGA3 356 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 ECHDC2Q86YB7 292 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 PGBD4Q96DM1 585 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 EIF2AQ9BY44 585 aaKnown RBP15.07■□□□□ 0
ERGIC3-213ENST00000475211 GBP3Q9H0R5 595 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 CDT1Q9H211 546 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 CGNQ9P2M7 1197 aaKnown RBP15.07■□□□□ 0
ERGIC3-213ENST00000475211 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 LRFN2Q9ULH4 789 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 USP20Q9Y2K6 914 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 GDAQ9Y2T3 454 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 ZMYM2Q9UBW7 1377 aa15.07■□□□□ 0
ERGIC3-213ENST00000475211 MORC3Q14149 939 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 KYAT1Q16773 422 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 RBM43Q6ZSC3 357 aaKnown RBP15.06■□□□□ 0
ERGIC3-213ENST00000475211 MRPL10Q7Z7H8 261 aaKnown RBP15.06■□□□□ 0
ERGIC3-213ENST00000475211 ZNF598Q86UK7 904 aaKnown RBP15.06■□□□□ 0
ERGIC3-213ENST00000475211 CDR2LQ86X02 465 aaPredicted RBP15.06■□□□□ 0
ERGIC3-213ENST00000475211 CRIPAKQ8N1N5 446 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 GOLGA5Q8TBA6 731 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 TOP1MTQ969P6 601 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 IPPQ9Y573 584 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 PCDHB7Q9Y5E2 793 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 STYXL1Q9Y6J8 313 aa15.06■□□□□ 0
ERGIC3-213ENST00000475211 A0A0B4J269 797 aa15.05■□□□□ -0
ERGIC3-213ENST00000475211 RBAK-RBAKDNI3L0D1 243 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms